/*************************************************************************** * GFilename.cpp - Filename class * * ----------------------------------------------------------------------- * * copyright (C) 2015-2017 by Juergen Knoedlseder * * ----------------------------------------------------------------------- * * * * This program is free software: you can redistribute it and/or modify * * it under the terms of the GNU General Public License as published by * * the Free Software Foundation, either version 3 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU General Public License for more details. * * * * You should have received a copy of the GNU General Public License * * along with this program. If not, see . * * * ***************************************************************************/ /** * @file GFilename.cpp * @brief Filename class interface implementation * @author Juergen Knoedlseder */ /* __ Includes ___________________________________________________________ */ #ifdef HAVE_CONFIG_H #include #endif #if defined(HAVE_LIBCFITSIO) #if defined(HAVE_CFITSIO_FITSIO_H) #include #elif defined(HAVE_LIBCFITSIO0_FITSIO_H) #include #else #include #endif #endif #include // for stat structure and S_ISREG #include // for std::remove() #include "GFilename.hpp" #include "GTools.hpp" #include "GException.hpp" /* __ Method name definitions ____________________________________________ */ #define G_SET_FILENAME "GFilename::set_filename(std::string&)" /* __ Macros _____________________________________________________________ */ /* __ Coding definitions _________________________________________________ */ /* __ Debug definitions __________________________________________________ */ /*========================================================================== = = = Constructors/destructors = = = ==========================================================================*/ /***********************************************************************//** * @brief Void constructor ***************************************************************************/ GFilename::GFilename(void) { // Initialise members init_members(); // Return return; } /***********************************************************************//** * @brief Filename constructor * * @param[in] filename File name. * * Constructs GFilename object by assigning a @p filename. ***************************************************************************/ GFilename::GFilename(const std::string& filename) { // Initialise members init_members(); // Set filename set_filename(filename); // Return return; } /***********************************************************************//** * @brief Filename constructor * * @param[in] filename File name. * * Constructs GFilename object by assigning a @p filename. ***************************************************************************/ GFilename::GFilename(const char* filename) { // Initialise members init_members(); // Set filename set_filename(std::string(filename)); // Return return; } /***********************************************************************//** * @brief Copy constructor * * @param[in] filename File name. ***************************************************************************/ GFilename::GFilename(const GFilename& filename) { // Initialise members init_members(); // Copy members copy_members(filename); // Return return; } /***********************************************************************//** * @brief Destructor ***************************************************************************/ GFilename::~GFilename(void) { // Free members free_members(); // Return return; } /*========================================================================== = = = Operators = = = ==========================================================================*/ /***********************************************************************//** * @brief Assignment operator * * @param[in] filename File name. * @return File name. ***************************************************************************/ GFilename& GFilename::operator=(const GFilename& filename) { // Execute only if object is not identical if (this != &filename) { // Free members free_members(); // Initialise members init_members(); // Copy members copy_members(filename); } // endif: object was not identical // Return return *this; } /*========================================================================== = = = Public methods = = = ==========================================================================*/ /***********************************************************************//** * @brief Clear file name ***************************************************************************/ void GFilename::clear(void) { // Free class members free_members(); // Initialise members init_members(); // Return return; } /***********************************************************************//** * @brief Clone file name * * @return Pointer to deep copy of file name. ***************************************************************************/ GFilename* GFilename::clone(void) const { // Clone object return new GFilename(*this); } /***********************************************************************//** * @brief Checks whether file exists * * @return True if file exists. * * Checks whether a file exists on disk. In case that the file is a FITS * file, the method also checks whether a compressed version of the file * (with a .gz, .Z, .z, or .zip extension) exists on disk (see is_fits() * method). ***************************************************************************/ bool GFilename::exists(void) const { // First check if file is a FITS file bool exists = is_fits(); // If the file is not a FITS file, then check whether a file with the // given name exists if (!exists) { // Allocate file information structure struct stat info; // Get file information structure int ret = stat(url().c_str(), &info); // If the file is a regular file then signal that it exists if (ret == 0 && S_ISREG(info.st_mode)) { exists = true; } } // endif: file was not a FITS file // Return result return (exists); } /***********************************************************************//** * @brief Return file type * * @return File type. * * Returns the file type based on the file extension name. Possible file * types are * * Type Extension names * fits .fits / .fit * * For any other file types an empty string will be returned. Any compression * extensions such as `.gz`, `.Z`, `.z` or `.zip` will be stripped. ***************************************************************************/ std::string GFilename::type(void) const { // Initialise empty file type std::string type = ""; // Initialise type with the name of the file std::string file = m_file; // Strip compression extensions size_t start = file.rfind(".gz"); if (start != std::string::npos) { file = file.substr(0, start); } start = file.rfind(".Z"); if (start != std::string::npos) { file = file.substr(0, start); } start = file.rfind(".z"); if (start != std::string::npos) { file = file.substr(0, start); } start = file.rfind(".zip"); if (start != std::string::npos) { file = file.substr(0, start); } // Extract file type start = file.rfind(".fits"); if (start != std::string::npos) { type = "fits"; } start = file.rfind(".fit"); if (start != std::string::npos) { type = "fits"; } // Return file type return type; } /***********************************************************************//** * @brief Checks whether file is a FITS file * * @return True if file is a FITS file. * * Test if the file or a compressed version of the file (with a .gz, .Z, .z, * or .zip extension) is a FITS file. This method is thread safe. ***************************************************************************/ bool GFilename::is_fits(void) const { // Initialise result bool is_fits = false; // Check now for a FITS file. This works only if cfitsio is available. // Put the code into a critical zone as it might be called from within // a parallelized thread. #if defined(HAVE_LIBCFITSIO) #pragma omp critical(GFilename_is_fits) { int status = 0; fitsfile* fptr = NULL; status = ffopen(&fptr, url().c_str(), 0, &status); if (status == 0) { is_fits = true; } ffclos(fptr, &status); } #endif // Return result return (is_fits); } /***********************************************************************//** * @brief Remove file from disk * * Removes file or a compressed version of the file (with a .gz, .Z, .z, * or .zip extension) if it exists on disk. ***************************************************************************/ void GFilename::remove(void) const { // Set compressed file name variants GFilename name_gz = url()+".gz"; GFilename name_Z = url()+".Z"; GFilename name_z = url()+".z"; GFilename name_zip = url()+".zip"; // Remove file if one of the variants exists on disk if (name_gz.exists()) { std::remove(name_gz.url().c_str()); } else if (name_Z.exists()) { std::remove(name_Z.url().c_str()); } else if (name_z.exists()) { std::remove(name_z.url().c_str()); } else if (name_zip.exists()) { std::remove(name_zip.url().c_str()); } else if (exists()) { std::remove(url().c_str()); } // Return return; } /***********************************************************************//** * @brief Return extension name * * @param[in] defaultname Default extension name (default: ""). * @return String containing extension name. * * Returns the extension name. If no extension name is given the name * provided by the @p defaultname argument will be used. By default, the * @p defaultname parameter is an empty string. ***************************************************************************/ std::string GFilename::extname(const std::string& defaultname) const { // Set the extension name std::string extname = m_extname; // If no extension name is set, the use the default extension name if (!has_extname()) { extname = defaultname; } // Return extension name return (extname); } /***********************************************************************//** * @brief Return extension number * * @param[in] defaultno Default extension number (default: -11). * @return Integer containing extension number. * * Returns the extension number. If no extension number is given the number * provided by the @p defaultno argument will be used. By default, the * @p defaultno parameter is set to -1. ***************************************************************************/ int GFilename::extno(const int& defaultno) const { // Set the extension number int extno = m_extno; // If no extension number is set, the use the default extension number if (!has_extno()) { extno = defaultno; } // Return extension number return (extno); } /***********************************************************************//** * @brief Return extension version number * * @param[in] defaultver Default extension version number (default: 0). * @return Integer containing extension version number. * * Returns the extension version number. If no extension version number is * given the number provided by the @p defaultver argument will be used. By * default, the @p defaultextver parameter is set to 0. ***************************************************************************/ int GFilename::extver(const int& defaultver) const { // Set the extension version int extver = m_extver; // If no extension version is set, the use the default extension version if (!has_extver()) { extver = defaultver; } // Return extension version return (extver); } /***********************************************************************//** * @brief Print file name information * * @param[in] chatter Chattiness (default: NORMAL). * @return String containing file name information. ***************************************************************************/ std::string GFilename::print(const GChatter& chatter) const { // Initialise result string std::string result; // Continue only if chatter is not silent if (chatter != SILENT) { // Append header result.append("=== GFilename ==="); // Append filename result.append("\n"+gammalib::parformat("File name")); result.append(m_filename); // Append URL result.append("\n"+gammalib::parformat("URL")); result.append(m_url); // Append protocol result.append("\n"+gammalib::parformat("Protocol")); result.append(m_protocol); // Append access path result.append("\n"+gammalib::parformat("Access path")); result.append(m_path); // Append file name result.append("\n"+gammalib::parformat("File")); result.append(m_file); // Append extension name result.append("\n"+gammalib::parformat("Extension name")); if (has_extname()) { result.append(m_extname); } else { result.append("Not provided"); } // Append extension number result.append("\n"+gammalib::parformat("Extension number")); if (has_extno()) { result.append(gammalib::str(m_extno)); } else { result.append("Not provided"); } // Append extension version result.append("\n"+gammalib::parformat("Extension version")); if (has_extver()) { result.append(gammalib::str(m_extver)); } else { result.append("Not provided"); } // Append expression result.append("\n"+gammalib::parformat("Selection expression")); if (has_expression()) { result.append(m_expression); } else { result.append("Not provided"); } } // endif: chatter was not silent // Return result return result; } /*========================================================================== = = = Private methods = = = ==========================================================================*/ /***********************************************************************//** * @brief Initialise class members ***************************************************************************/ void GFilename::init_members(void) { // Initialise members m_filename.clear(); m_url.clear(); m_protocol.clear(); m_path.clear(); m_file.clear(); m_extname.clear(); m_extno = -1; m_extver = 0; m_expression.clear(); // Return return; } /***********************************************************************//** * @brief Copy class members * * @param[in] filename File name. ***************************************************************************/ void GFilename::copy_members(const GFilename& filename) { // Copy members m_filename = filename.m_filename; m_url = filename.m_url; m_protocol = filename.m_protocol; m_path = filename.m_path; m_file = filename.m_file; m_extname = filename.m_extname; m_extno = filename.m_extno; m_extver = filename.m_extver; m_expression = filename.m_expression; // Return return; } /***********************************************************************//** * @brief Delete class members ***************************************************************************/ void GFilename::free_members(void) { // Return return; } /***********************************************************************//** * @brief Set file name * * @param[in] filename File name. * * @exception GException::invalid_argument * Invalid file name specified. * * Sets all attributes of the object by parsing the file name. The file name * can have one of the following formats: * * file.fits No extension * file.fits[1] Extension number 1 (starting from 0) * file.fits[EVENTS] EVENTS extension * file.fits[EVENTS,2] Version 2 of the EVENTS extension ***************************************************************************/ void GFilename::set_filename(const std::string& filename) { // Clear file name clear(); // Strip any whitespace and store the full name m_filename = gammalib::strip_whitespace(filename); // Continue only if filename is not empty if (!m_filename.empty()) { // Check for [ symbol in filename size_t start = m_filename.find_first_of("["); // If we have an extension then separate filename into filename // part and extension part and fill the information of th object if (start != std::string::npos) { // Check for ] symbol in filename size_t stop = m_filename.find_first_of("]", start); // If there is no ] symbol then throw an exception if (stop == std::string::npos) { std::string msg = "Missing ] symbol in file name \""+ m_filename+"\" extension. Please correct " "the file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } // If ] is not the last character then check if an opening bracket is next if (stop < m_filename.length()-1) { // Get character std::string character = gammalib::strip_whitespace(m_filename.substr(stop+1,1)); // If no bracket is coming, throw an exception if (character != "[") { std::string msg = "Non-bracket character \""+character+ "\" beyond ] symbol in file name \""+ m_filename+"\" expression. Please " "correct the file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } } // Extract extension name std::string extname = gammalib::strip_whitespace(m_filename.substr(start+1, stop-start-1)); // Check if there is a , symbol that separates extension name // and extension version size_t sep = extname.find_first_of(","); // If we have a separator, then extract the extension version if (sep != std::string::npos) { // Get extension version string std::string extver = gammalib::strip_whitespace(extname.substr(sep+1, std::string::npos)); // If string is empty then throw an exception if (extver.empty()) { std::string msg = "No extension version found after , " "symbol in file name \""+m_filename+ "\". Please correct the file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } // Extract extension version m_extver = gammalib::toint(extver); // Throw an exception if the extension version is not // positive if (m_extver <= 0) { std::string msg = "Non-positive extension version " "encountered in file name \""+ m_filename+ "\". Please correct the " "file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } // Update the extension name extname = gammalib::strip_whitespace(extname.substr(0,sep)); } // endif: extension version provided // If we have an empty extension name then throw an exception if (extname.empty()) { std::string msg = "An empty extension has been specified in " "file name \""+m_filename+"\". Please " "correct the file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } // If we have a purely numerical extension then convert the // extension name into an extension number if (extname.find_first_not_of("+-0123456789") == std::string::npos) { // Extract extension number m_extno = gammalib::toint(extname); // Throw an exception if the extension version is not // positive if (m_extno < 0) { std::string msg = "Negative extension number encountered " "in file name \""+m_filename+"\". " "Please correct the file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } } // endif: extension number provided // ... otherwise store the extension name else { // Store extension name m_extname = gammalib::toupper(extname); // Throw an exception if extension name is empty if (m_extname.empty()) { std::string msg = "Empty extension name encountered " "in file name \""+m_filename+"\". " "Please correct the file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } } // endelse: extension name provided // Store the file name m_url = gammalib::strip_whitespace(m_filename.substr(0,start)); // Check if there is an expression behind the extension name size_t expr_start = m_filename.find_first_of("[", stop+1); if (expr_start != std::string::npos) { // Check for ] symbol in expression size_t expr_stop = m_filename.find_first_of("]", expr_start); // If there is no ] symbol then throw an exception if (expr_stop == std::string::npos) { std::string msg = "Missing ] symbol in file name \""+ m_filename+"\" expression. Please " "correct the file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } // If ] is not the last character then throw an exception if (expr_stop < m_filename.length()-1) { std::string msg = "Characters beyond ] symbol in file " "name \""+m_filename+"\" expression. " "Please correct the file name."; throw GException::invalid_argument(G_SET_FILENAME, msg); } // Store expression m_expression = gammalib::strip_whitespace(m_filename.substr(expr_start+1, expr_stop - expr_start-1)); } } // endif: had extension // ... otherwise simply set the filename else { m_url = m_filename; } // Extract access protocol size_t proto_end = m_filename.find_first_of(":"); if (proto_end != std::string::npos) { m_protocol = m_filename.substr(0, proto_end); proto_end++; } else { proto_end = 0; } // Set start and end of file name size_t file_start = m_filename.find_last_of("/"); size_t file_end = (start == std::string::npos) ? m_filename.length() : start; // If a "/" symbol was found then extract the path and file if (file_start != std::string::npos) { // Extract path size_t path_start = m_filename.find_first_not_of("/", proto_end); if (path_start != std::string::npos) { if (path_start > 0) { path_start--; } int length = file_start - path_start + 1; if (length > 0) { m_path = m_filename.substr(path_start, length); } } // Extract file name int length = file_end - file_start - 1; if (length > 0) { m_file = m_filename.substr(file_start+1, length); } } // ... otherwise there is no path and we only extract the file else { int length = file_end - proto_end; if (length > 0) { m_file = m_filename.substr(proto_end, length); } } } // endif: filename was not empty // Return return; }