tutorials.py
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#! /usr/bin/env python
# ==========================================================================
# This script tests the Sphinx tutorials
#
# Usage:
# ./tutorials.py
#
# --------------------------------------------------------------------------
#
# Copyright (C) 2021 Juergen Knoedlseder
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
#
# ==========================================================================
import os
import sys
import subprocess
import gammalib
import ctools
import cscripts
# ===================================== #
# Test class for tutorials verification #
# ===================================== #
class tutorials(gammalib.GPythonTestSuite):
"""
Test class for tutorials verification
"""
# Constructor
def __init__(self):
"""
Constructor
"""
# Call base class constructor
gammalib.GPythonTestSuite.__init__(self)
# Initialise results
self.results = None
# Return
return
# Set test functions
def set(self):
"""
Set all test functions
"""
# Set test name
self.name('Tutorials Verification')
# Append tutorials
self.append(self.tutorials_1dc, 'Test 1DC tutorial')
# Return
return
# Test line execution
def _execute_cmd(self, cmd, args):
"""
Execute command
"""
# Create subprocess for tool
p = subprocess.Popen(cmd.split(' '), stdout=subprocess.PIPE,
stdin=subprocess.PIPE,
stderr=subprocess.PIPE)
# Write command arguments parameters
if len(args) > 0:
p.stdin.write(b'%s' % args)
p.stdin.close()
# Get results
res = p.communicate()
# Set error flag and text
name = 'Test execution of command %s.' % cmd
self.test_assert((len(res[1]) == 0), name, res[1])
# Return
return
# Test line execution
def _test_line_execution(self, lines):
"""
Test the execution of a sequence of commands
Parameters
----------
lines : list of str
Command lines
"""
# Initialise commands and arguments
cmd = ''
args = ''
# Loop over all lines
for line in lines:
# If line starts with a string then extract or execute command
if line[0:2] == '$ ':
# If we have a command then execute it
if cmd != '':
print(cmd, args)
self._execute_cmd(cmd, args)
# Set new command
cmd = line[2:]
args = ''
# ... otherwise add argument
else:
args += '%s\n' % (gammalib.strip_whitespace(line))
# If there is a pending command then execute it
if cmd != '':
print(cmd, args)
self._execute_cmd(cmd, args)
# Return
return
# Test ctool or cscript execution
def _test_ctool_execution(self, tool, lines):
"""
Test the execution of a ctool or cscript
The methods test the execution of a ctool or cscript as executed from
the command line emulating the entering of the queried parameters. Any
error that occurs in the execution will be signaled and the Python
traceback will be put in the error message field.
Parameters
----------
tool : str
ctool name
lines : list of str
Command lines
"""
# Initialise command
cmd = ''
# Append lines
for line in lines:
pos = line.find(']')
if pos != -1:
arg = gammalib.strip_whitespace(line[pos+1:])
cmd += '%s\n' % arg
# Create subprocess for tool
p = subprocess.Popen([tool], stdout=subprocess.PIPE,
stdin=subprocess.PIPE,
stderr=subprocess.PIPE)
# Write command line parameters
p.stdin.write(b'%s' % cmd)
# Get results
res = p.communicate()
# Close pipeline
p.stdin.close()
# Set error flag and text
name = 'Test execution of %s.' % tool
self.test_assert((len(res[1]) == 0), name, res[1])
# Return
return
# Add workflow step
def _add_workflow_step(self, tool, lines):
"""
Add workflow step
Parameters
----------
tool : str
Tool name
lines : list of str
Command lines
Returns
-------
cmd : str
Workflow command
"""
# If tool is a ctool or cscript then add a ctool or cscript workflow
# step
if tool[0:2] == 'ct' or tool[0:2] == 'cs':
self._test_ctool_execution(tool, lines)
# ... otherwise execute lines
else:
all_lines = ['$ %s' % tool]
all_lines.extend(lines)
self._test_line_execution(all_lines)
# Return
return
# Extract workflow
def _get_workflow(self, filename):
"""
Extract workflow from Sphinx rst file
Parameters
----------
filename : str
RST filename
Returns
-------
workflow : `~gammalib.GXml`
Workflow XML file
"""
# Open RST file
f = open(filename, 'r')
# Signal code block
code = False
# Loop over lines
for line in f:
# If we are not in a code block then check whether a code block
# starts
if not code:
pos = line.find('code-block:: bash')
if pos != -1:
code = True
start = -1
tool = ''
lines = []
continue
# ... otherwise
else:
# If we have no tool name then find tool name
if tool == '':
pos = line.find(' $ ')
if pos != -1:
start = pos+1
tool = line[pos+3:-1]
continue
# ... otherwise append lines or add workflow step
else:
blank = gammalib.strip_whitespace(line[0:start])
cmd = line[start:-1]
if len(blank) == 0 and cmd[0] != ' ':
lines.append(cmd)
continue
else:
self._add_workflow_step(tool, lines)
code = False
continue
# Add step if some code is pending
if code:
self._add_workflow_step(tool, lines)
# Return
return
# Test 1DC tutorials
def tutorials_1dc(self):
"""
Test 1DC tutorials
"""
# Set environment variables
os.environ['CTADATA'] = '/project-data/cta/data/1dc'
os.environ['CALDB'] = '/project-data/cta/data/1dc/caldb'
# Extract workflow
#workflow = self._get_workflow('../doc/source/users/tutorials/1dc/first_onoff.rst')
workflow = self._get_workflow('first_onoff.rst')
# Run workflow
# Return
return
# ======================== #
# Main routine entry point #
# ======================== #
if __name__ == '__main__':
# Allocate test suite container
suites = gammalib.GTestSuites('ctools tutorials verification')
# Allocate test suite and append it to the container
suite_tutorials = tutorials()
# Setup test suit
suite_tutorials.set()
# Append test suite to container
suites.append(suite_tutorials)
# Create pfiles directory
try:
os.mkdir('pfiles')
except:
pass
# Copy ctools parameter files into pfiles directory
os.system('cp -r ../src/*/*.par pfiles/')
# Set PFILES environment variable
os.environ['PFILES'] = 'pfiles'
# Run test suite
success = suites.run()
# Save test results
suites.save('reports/tutorials.xml')
# Set return code
if success:
rc = 0
else:
rc = 1
# Exit with return code
sys.exit(rc)