Commit 47f5646116cc567b28a6d3a729d19b8725b20848
1 parent
b7096783
Implement unbinned pipeline tests
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3 changed files
with
127 additions
and
16 deletions
cscripts/__init__.py
| ... | ... | @@ -34,19 +34,17 @@ from .cstsdist import cstsdist |
| 34 | 34 | from . import obsutils |
| 35 | 35 | |
| 36 | 36 | |
| 37 | -def test(): | |
| 37 | +def test(verbosity=2): | |
| 38 | 38 | """Run ctools tests. |
| 39 | 39 | """ |
| 40 | 40 | import unittest |
| 41 | 41 | from .tests.test_unbinned import TestUnbinnedAnalysis |
| 42 | - from .tests.test_binned import TestBinnedAnalysis | |
| 43 | - # suite = unittest.TestLoader().loadTestsFromTestCase(TestUnbinnedAnalysis) | |
| 44 | - # unittest.TextTestRunner(verbosity=2).run(suite) | |
| 42 | + | |
| 45 | 43 | test_suite = unittest.TestSuite() |
| 46 | 44 | |
| 47 | 45 | # Test cases must be listed manually here ... |
| 48 | 46 | # we currently don't use unittest for test collection |
| 49 | 47 | test_suite.addTest(unittest.makeSuite(TestUnbinnedAnalysis)) |
| 50 | - test_suite.addTest(unittest.makeSuite(TestBinnedAnalysis)) | |
| 51 | 48 | |
| 52 | - unittest.TextTestRunner(verbosity=2).run(test_suite) | |
| 49 | + test_runner = unittest.TextTestRunner(verbosity=verbosity) | |
| 50 | + test_runner.run(test_suite) | ... | ... |
cscripts/tests/test_binned.py deleted
cscripts/tests/test_unbinned.py
| 1 | 1 | """Test unbinned analysis. |
| 2 | + | |
| 3 | +TODO: This is basically a duplicate of `test/test_pipelines.py` | |
| 4 | + The duplication should be avoided somehow. | |
| 5 | + | |
| 2 | 6 | """ |
| 7 | +import os | |
| 8 | +from tempfile import mkdtemp | |
| 3 | 9 | import unittest |
| 10 | +import ctools | |
| 11 | + | |
| 4 | 12 | |
| 5 | 13 | class TestUnbinnedAnalysis(unittest.TestCase): |
| 14 | + """Test a simple unbinned analysis pipeline. | |
| 15 | + """ | |
| 16 | + | |
| 17 | + def setUp(self): | |
| 18 | + gammalib_dir = os.environ['GAMMALIB'] | |
| 19 | + self.model_name = os.path.join(gammalib_dir, "share/models/crab.xml") | |
| 20 | + self.workdir = mkdtemp() | |
| 21 | + | |
| 22 | + def test_unbinned_fits(self): | |
| 23 | + """ | |
| 24 | + Test unbinned pipeline with FITS file saving. | |
| 25 | + """ | |
| 26 | + # Set script parameters | |
| 27 | + model_name = self.model_name | |
| 28 | + events_name = os.path.join(self.workdir, "events.fits") | |
| 29 | + selected_events_name = os.path.join(self.workdir, "selected_events.fits") | |
| 30 | + result_name = os.path.join(self.workdir, "results.xml") | |
| 31 | + caldb = "prod2" | |
| 32 | + irf = "South_50h" | |
| 33 | + ra = 83.63 | |
| 34 | + dec = 22.01 | |
| 35 | + rad_sim = 10.0 | |
| 36 | + tstart = 0.0 | |
| 37 | + tstop = 1800.0 | |
| 38 | + emin = 0.1 | |
| 39 | + emax = 100.0 | |
| 40 | + rad_select = 3.0 | |
| 41 | + | |
| 42 | + # Simulate events | |
| 43 | + sim = ctools.ctobssim() | |
| 44 | + sim["inmodel"] = model_name | |
| 45 | + sim["outevents"] = events_name | |
| 46 | + sim["caldb"] = caldb | |
| 47 | + sim["irf"] = irf | |
| 48 | + sim["ra"] = ra | |
| 49 | + sim["dec"] = dec | |
| 50 | + sim["rad"] = rad_sim | |
| 51 | + sim["tmin"] = tstart | |
| 52 | + sim["tmax"] = tstop | |
| 53 | + sim["emin"] = emin | |
| 54 | + sim["emax"] = emax | |
| 55 | + sim.execute() | |
| 56 | + | |
| 57 | + # Select events | |
| 58 | + select = ctools.ctselect() | |
| 59 | + select["inobs"] = events_name | |
| 60 | + select["outobs"] = selected_events_name | |
| 61 | + select["ra"] = ra | |
| 62 | + select["dec"] = dec | |
| 63 | + select["rad"] = rad_select | |
| 64 | + select["tmin"] = tstart | |
| 65 | + select["tmax"] = tstop | |
| 66 | + select["emin"] = emin | |
| 67 | + select["emax"] = emax | |
| 68 | + select.execute() | |
| 69 | + | |
| 70 | + # Perform maximum likelihood fitting | |
| 71 | + like = ctools.ctlike() | |
| 72 | + like["inobs"] = selected_events_name | |
| 73 | + like["inmodel"] = model_name | |
| 74 | + like["outmodel"] = result_name | |
| 75 | + like["caldb"] = caldb | |
| 76 | + like["irf"] = irf | |
| 77 | + like.execute() | |
| 78 | + | |
| 79 | + # TODO: add asserts | |
| 80 | + assert True | |
| 81 | + | |
| 82 | + def test_unbinned_mem(self): | |
| 83 | + """ | |
| 84 | + Test unbinned in-memory pipeline. | |
| 85 | + """ | |
| 86 | + # Set script parameters | |
| 87 | + model_name = self.model_name | |
| 88 | + caldb = "prod2" | |
| 89 | + irf = "South_50h" | |
| 90 | + ra = 83.63 | |
| 91 | + dec = 22.01 | |
| 92 | + rad_sim = 10.0 | |
| 93 | + tstart = 0.0 | |
| 94 | + tstop = 1800.0 | |
| 95 | + emin = 0.1 | |
| 96 | + emax = 100.0 | |
| 97 | + rad_select = 3.0 | |
| 98 | + | |
| 99 | + # Simulate events | |
| 100 | + sim = ctools.ctobssim() | |
| 101 | + sim["inmodel"] = model_name | |
| 102 | + sim["caldb"] = caldb | |
| 103 | + sim["irf"] = irf | |
| 104 | + sim["ra"] = ra | |
| 105 | + sim["dec"] = dec | |
| 106 | + sim["rad"] = rad_sim | |
| 107 | + sim["tmin"] = tstart | |
| 108 | + sim["tmax"] = tstop | |
| 109 | + sim["emin"] = emin | |
| 110 | + sim["emax"] = emax | |
| 111 | + sim.run() | |
| 112 | + | |
| 113 | + # Select events | |
| 114 | + select = ctools.ctselect(sim.obs()) | |
| 115 | + select["ra"] = ra | |
| 116 | + select["dec"] = dec | |
| 117 | + select["rad"] = rad_select | |
| 118 | + select["tmin"] = tstart | |
| 119 | + select["tmax"] = tstop | |
| 120 | + select["emin"] = emin | |
| 121 | + select["emax"] = emax | |
| 122 | + select.run() | |
| 123 | + | |
| 124 | + # Perform maximum likelihood fitting | |
| 125 | + like = ctools.ctlike(select.obs()) | |
| 126 | + like.run() | |
| 6 | 127 | |
| 7 | - def test_it(self): | |
| 8 | - self.assertEqual('foo'.upper(), 'FOO') | |
| 128 | + # TODO: add asserts | |
| 129 | + assert True | ... | ... |