Commit 6549003c95f1e9072f61c7e4aba2dde8a9cdbb20
1 parent
e0744861
Fix cslightcrv (#1920)
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5 changed files
with
33 additions
and
41 deletions
ChangeLog
| @@ -3,6 +3,7 @@ | @@ -3,6 +3,7 @@ | ||
| 3 | * Version 1.2.0 released | 3 | * Version 1.2.0 released |
| 4 | ======================== | 4 | ======================== |
| 5 | 5 | ||
| 6 | + cslightcrv no longer accepts counts cubes on input (#1920) | ||
| 6 | Set ctbin reference time to CTA reference time (#1922) | 7 | Set ctbin reference time to CTA reference time (#1922) |
| 7 | Change ds9file parameter to outds9file | 8 | Change ds9file parameter to outds9file |
| 8 | Add cssrcdetect script (#1617) | 9 | Add cssrcdetect script (#1617) |
NEWS
| @@ -244,6 +244,9 @@ Improve the upper limit computation in the cslightcrv script. Now all source | @@ -244,6 +244,9 @@ Improve the upper limit computation in the cslightcrv script. Now all source | ||
| 244 | parameters, except the source intensity, are set to the initial values given | 244 | parameters, except the source intensity, are set to the initial values given |
| 245 | in the model definition file for upper limit computation. | 245 | in the model definition file for upper limit computation. |
| 246 | 246 | ||
| 247 | +The cslightcrv script no longer accepts counts cubes on input as no light | ||
| 248 | +curves can be derived from counts cubes (#1920). | ||
| 249 | + | ||
| 247 | 250 | ||
| 248 | Examples | 251 | Examples |
| 249 | -------- | 252 | -------- |
cscripts/cslightcrv.par
| @@ -16,13 +16,9 @@ | @@ -16,13 +16,9 @@ | ||
| 16 | # | 16 | # |
| 17 | # Input and output parameters | 17 | # Input and output parameters |
| 18 | #============================ | 18 | #============================ |
| 19 | -inobs, f, a, events.fits,,, "Input event list, counts cube, or observation definition XML file" | 19 | +inobs, f, a, events.fits,,, "Input event list or observation definition XML file" |
| 20 | inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file" | 20 | inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file" |
| 21 | srcname, s, a, Crab,,, "Source name" | 21 | srcname, s, a, Crab,,, "Source name" |
| 22 | -expcube, f, a, NONE,,, "Input exposure cube file (only needed for stacked analysis)" | ||
| 23 | -psfcube, f, a, NONE,,, "Input PSF cube file (only needed for stacked analysis)" | ||
| 24 | -edispcube, f, a, NONE,,, "Input energy dispersion cube file (only needed for stacked analysis)" | ||
| 25 | -bkgcube, f, a, NONE,,, "Input background cube file (only needed for stacked analysis)" | ||
| 26 | caldb, s, a, prod2,,, "Calibration database" | 22 | caldb, s, a, prod2,,, "Calibration database" |
| 27 | irf, s, a, South_0.5h,,, "Instrument response function" | 23 | irf, s, a, South_0.5h,,, "Instrument response function" |
| 28 | edisp, b, h, no,,, "Apply energy dispersion?" | 24 | edisp, b, h, no,,, "Apply energy dispersion?" |
cscripts/cslightcrv.py
| @@ -41,7 +41,7 @@ class cslightcrv(ctools.cscript): | @@ -41,7 +41,7 @@ class cslightcrv(ctools.cscript): | ||
| 41 | The format of the ASCII file is one row per time bin, each specifying | 41 | The format of the ASCII file is one row per time bin, each specifying |
| 42 | the start of stop value of the bin, separated by a whitespace. The | 42 | the start of stop value of the bin, separated by a whitespace. The |
| 43 | times are given in Modified Julian Days (MJD). | 43 | times are given in Modified Julian Days (MJD). |
| 44 | - | 44 | + |
| 45 | Examples: | 45 | Examples: |
| 46 | >>> lcrv = cslightcrv() | 46 | >>> lcrv = cslightcrv() |
| 47 | >>> lcrv.run() | 47 | >>> lcrv.run() |
| @@ -92,17 +92,18 @@ class cslightcrv(ctools.cscript): | @@ -92,17 +92,18 @@ class cslightcrv(ctools.cscript): | ||
| 92 | """ | 92 | """ |
| 93 | Get parameters from parfile | 93 | Get parameters from parfile |
| 94 | """ | 94 | """ |
| 95 | - # Setup observations | ||
| 96 | - self._setup_observations(self._obs) | 95 | + # Setup observations (require response and allow event list, don't |
| 96 | + # allow counts cube) | ||
| 97 | + self._setup_observations(self._obs, True, True, False) | ||
| 97 | 98 | ||
| 98 | # Set models if there are none in the container | 99 | # Set models if there are none in the container |
| 99 | if self._obs.models().size() == 0: | 100 | if self._obs.models().size() == 0: |
| 100 | self._obs.models(self['inmodel'].filename()) | 101 | self._obs.models(self['inmodel'].filename()) |
| 101 | 102 | ||
| 102 | - # Get source name | 103 | + # Get source name |
| 103 | self._srcname = self['srcname'].string() | 104 | self._srcname = self['srcname'].string() |
| 104 | 105 | ||
| 105 | - # Get time boundaries | 106 | + # Get time boundaries |
| 106 | self._tbins = self._create_tbounds() | 107 | self._tbins = self._create_tbounds() |
| 107 | 108 | ||
| 108 | # Set stacked analysis flag to True if the requested number of | 109 | # Set stacked analysis flag to True if the requested number of |
| @@ -127,7 +128,7 @@ class cslightcrv(ctools.cscript): | @@ -127,7 +128,7 @@ class cslightcrv(ctools.cscript): | ||
| 127 | self['nxpix'].integer() | 128 | self['nxpix'].integer() |
| 128 | self['nypix'].integer() | 129 | self['nypix'].integer() |
| 129 | self['binsz'].real() | 130 | self['binsz'].real() |
| 130 | - | 131 | + |
| 131 | # Do the same for the hidden parameters, just in case | 132 | # Do the same for the hidden parameters, just in case |
| 132 | self['edisp'].boolean() | 133 | self['edisp'].boolean() |
| 133 | self['calc_ulim'].boolean() | 134 | self['calc_ulim'].boolean() |
| @@ -161,14 +162,14 @@ class cslightcrv(ctools.cscript): | @@ -161,14 +162,14 @@ class cslightcrv(ctools.cscript): | ||
| 161 | # values are "FILE", "LIN" and "GTI". This is enforced at | 162 | # values are "FILE", "LIN" and "GTI". This is enforced at |
| 162 | # parameter file level, hence no checking is needed. | 163 | # parameter file level, hence no checking is needed. |
| 163 | algorithm = self['tbinalg'].string() | 164 | algorithm = self['tbinalg'].string() |
| 164 | - | 165 | + |
| 165 | # If the algorithm is "FILE" then handle a FITS or an ASCII file for | 166 | # If the algorithm is "FILE" then handle a FITS or an ASCII file for |
| 166 | # the time bin definition | 167 | # the time bin definition |
| 167 | if algorithm == 'FILE': | 168 | if algorithm == 'FILE': |
| 168 | 169 | ||
| 169 | # Get the filename | 170 | # Get the filename |
| 170 | filename = self['tbinfile'].filename() | 171 | filename = self['tbinfile'].filename() |
| 171 | - | 172 | + |
| 172 | # If the file a FITS file then load GTIs directly | 173 | # If the file a FITS file then load GTIs directly |
| 173 | if filename.is_fits(): | 174 | if filename.is_fits(): |
| 174 | gti.load(filename) | 175 | gti.load(filename) |
| @@ -212,14 +213,14 @@ class cslightcrv(ctools.cscript): | @@ -212,14 +213,14 @@ class cslightcrv(ctools.cscript): | ||
| 212 | for i in range(obs.events().gti().size()): | 213 | for i in range(obs.events().gti().size()): |
| 213 | gti.append(obs.events().gti().tstart(i), | 214 | gti.append(obs.events().gti().tstart(i), |
| 214 | obs.events().gti().tstop(i)) | 215 | obs.events().gti().tstop(i)) |
| 215 | - | 216 | + |
| 216 | # Return Good Time Intervals | 217 | # Return Good Time Intervals |
| 217 | return gti | 218 | return gti |
| 218 | 219 | ||
| 219 | def _get_free_par_names(self): | 220 | def _get_free_par_names(self): |
| 220 | """ | 221 | """ |
| 221 | Return list of free parameter names | 222 | Return list of free parameter names |
| 222 | - | 223 | + |
| 223 | Returns | 224 | Returns |
| 224 | ------- | 225 | ------- |
| 225 | names : list of str | 226 | names : list of str |
| @@ -469,7 +470,7 @@ class cslightcrv(ctools.cscript): | @@ -469,7 +470,7 @@ class cslightcrv(ctools.cscript): | ||
| 469 | 470 | ||
| 470 | # Retrieve a new oberservation container | 471 | # Retrieve a new oberservation container |
| 471 | new_obs = cntcube.obs().copy() | 472 | new_obs = cntcube.obs().copy() |
| 472 | - | 473 | + |
| 473 | # Set stacked response | 474 | # Set stacked response |
| 474 | if self['edisp'].boolean(): | 475 | if self['edisp'].boolean(): |
| 475 | new_obs[0].response(response['expcube'], response['psfcube'], | 476 | new_obs[0].response(response['expcube'], response['psfcube'], |
| @@ -480,7 +481,7 @@ class cslightcrv(ctools.cscript): | @@ -480,7 +481,7 @@ class cslightcrv(ctools.cscript): | ||
| 480 | 481 | ||
| 481 | # Get new models | 482 | # Get new models |
| 482 | models = response['models'] | 483 | models = response['models'] |
| 483 | - | 484 | + |
| 484 | # Fix background models if required | 485 | # Fix background models if required |
| 485 | if self['fix_bkg'].boolean(): | 486 | if self['fix_bkg'].boolean(): |
| 486 | for model in models: | 487 | for model in models: |
| @@ -688,7 +689,7 @@ class cslightcrv(ctools.cscript): | @@ -688,7 +689,7 @@ class cslightcrv(ctools.cscript): | ||
| 688 | 689 | ||
| 689 | # Get light curve filename | 690 | # Get light curve filename |
| 690 | outfile = self['outfile'].filename() | 691 | outfile = self['outfile'].filename() |
| 691 | - | 692 | + |
| 692 | # Continue only filename and residual map are valid | 693 | # Continue only filename and residual map are valid |
| 693 | if self._fits != None: | 694 | if self._fits != None: |
| 694 | 695 |
doc/source/users/reference_manual/cslightcrv.rst
| @@ -26,8 +26,8 @@ upper flux limit. | @@ -26,8 +26,8 @@ upper flux limit. | ||
| 26 | General parameters | 26 | General parameters |
| 27 | ------------------ | 27 | ------------------ |
| 28 | 28 | ||
| 29 | -``(inobs = NONE) [file]`` | ||
| 30 | - Input event list, counts cube or observation definition XML file. | 29 | +``inobs [file]`` |
| 30 | + Input event list or observation definition XML file. | ||
| 31 | 31 | ||
| 32 | ``inmodel [file]`` | 32 | ``inmodel [file]`` |
| 33 | Input model XML file. | 33 | Input model XML file. |
| @@ -36,24 +36,21 @@ General parameters | @@ -36,24 +36,21 @@ General parameters | ||
| 36 | Name of the source in the source model XML file which should be used | 36 | Name of the source in the source model XML file which should be used |
| 37 | for sensitivity computation. | 37 | for sensitivity computation. |
| 38 | 38 | ||
| 39 | -``outfile [file]`` | ||
| 40 | - Name of the source spectrum output file. | ||
| 41 | - | ||
| 42 | -``expcube [file]`` | ||
| 43 | - Exposure cube file (only needed for stacked analysis). | ||
| 44 | - | ||
| 45 | -``psfcube [file]`` | ||
| 46 | - PSF cube file (only needed for stacked analysis). | ||
| 47 | - | ||
| 48 | -``bkgcube [file]`` | ||
| 49 | - Background cube file (only needed for stacked analysis). | ||
| 50 | - | ||
| 51 | ``caldb [string]`` | 39 | ``caldb [string]`` |
| 52 | Calibration database. | 40 | Calibration database. |
| 53 | 41 | ||
| 54 | ``irf [string]`` | 42 | ``irf [string]`` |
| 55 | Instrumental response function. | 43 | Instrumental response function. |
| 56 | 44 | ||
| 45 | +``(edisp = no) [boolean]`` | ||
| 46 | + Applies energy dispersion to response computation. | ||
| 47 | + | ||
| 48 | +``outfile [file]`` | ||
| 49 | + Name of the source spectrum output file. | ||
| 50 | + | ||
| 51 | +``(tbinalg = GTI) <FILE|LIN|GTI> [string]`` | ||
| 52 | + Algorithm for defining time bins. | ||
| 53 | + | ||
| 57 | ``tmin [real]`` | 54 | ``tmin [real]`` |
| 58 | Lightcurve start time (in MJD). | 55 | Lightcurve start time (in MJD). |
| 59 | 56 | ||
| @@ -63,24 +60,18 @@ General parameters | @@ -63,24 +60,18 @@ General parameters | ||
| 63 | ``tbins [integer]`` | 60 | ``tbins [integer]`` |
| 64 | Number of time bins. | 61 | Number of time bins. |
| 65 | 62 | ||
| 66 | -``(tbinalg = GTI) <FILE|LIN|GTI> [string]`` | ||
| 67 | - Algorithm for defining time bins. | ||
| 68 | - | ||
| 69 | ``tbinfile [file]`` | 63 | ``tbinfile [file]`` |
| 70 | File defining the time binning. | 64 | File defining the time binning. |
| 71 | 65 | ||
| 72 | -``binned [boolean]`` | ||
| 73 | - Use binned analysis in each time bin. | ||
| 74 | - | ||
| 75 | -``enumbins [integer]`` | ||
| 76 | - Number of energy bins per light curve bin (0=unbinned). | ||
| 77 | - | ||
| 78 | ``emin [real]`` | 66 | ``emin [real]`` |
| 79 | Lower energy limit of events (in TeV). | 67 | Lower energy limit of events (in TeV). |
| 80 | 68 | ||
| 81 | ``emax [real]`` | 69 | ``emax [real]`` |
| 82 | Upper energy limit of events (in TeV). | 70 | Upper energy limit of events (in TeV). |
| 83 | 71 | ||
| 72 | +``enumbins [integer]`` | ||
| 73 | + Number of energy bins per light curve bin (0=unbinned). | ||
| 74 | + | ||
| 84 | ``coordsys <CEL|GAL> [string]`` | 75 | ``coordsys <CEL|GAL> [string]`` |
| 85 | Coordinate system (CEL - celestial, GAL - galactic). | 76 | Coordinate system (CEL - celestial, GAL - galactic). |
| 86 | 77 |