Commit e77f96b37c593cb9ae4ce9299191dd99e60d586e
1 parent
816acf9e
Add cspull script unit test.
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5 changed files
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272 additions
and
4 deletions
cscripts/Makefile.am
| @@ -33,6 +33,7 @@ testscripts = tests/__init__.py \ | @@ -33,6 +33,7 @@ testscripts = tests/__init__.py \ | ||
| 33 | ../test/test_csobs2caldb.py \ | 33 | ../test/test_csobs2caldb.py \ |
| 34 | ../test/test_csobsdef.py \ | 34 | ../test/test_csobsdef.py \ |
| 35 | ../test/test_csobsinfo.py \ | 35 | ../test/test_csobsinfo.py \ |
| 36 | + ../test/test_cspull.py \ | ||
| 36 | ../test/test_csfindobs.py \ | 37 | ../test/test_csfindobs.py \ |
| 37 | ../test/test_csiactcopy.py \ | 38 | ../test/test_csiactcopy.py \ |
| 38 | ../test/test_csiactdata.py \ | 39 | ../test/test_csiactdata.py \ |
cscripts/cspull.py
| @@ -82,10 +82,8 @@ class cspull(ctools.cscript): | @@ -82,10 +82,8 @@ class cspull(ctools.cscript): | ||
| 82 | """ | 82 | """ |
| 83 | Get parameters from parfile. | 83 | Get parameters from parfile. |
| 84 | """ | 84 | """ |
| 85 | - # Get parameters | ||
| 86 | - | ||
| 87 | - # Set observation if not done before | ||
| 88 | - if self._obs == None or self._obs.size() == 0: | 85 | + # If there are no observations in container then get some ... |
| 86 | + if self._obs.size() == 0: | ||
| 89 | self._obs = self._get_observations() | 87 | self._obs = self._get_observations() |
| 90 | 88 | ||
| 91 | # Check for requested pattern and use above | 89 | # Check for requested pattern and use above |
| @@ -94,6 +92,11 @@ class cspull(ctools.cscript): | @@ -94,6 +92,11 @@ class cspull(ctools.cscript): | ||
| 94 | if self._pattern == "four": | 92 | if self._pattern == "four": |
| 95 | self._obs = self._set_obs() | 93 | self._obs = self._set_obs() |
| 96 | 94 | ||
| 95 | + # ... otherwise add response information and energy boundaries | ||
| 96 | + # in case they are missing. | ||
| 97 | + else: | ||
| 98 | + self._setup_observations(self._obs) | ||
| 99 | + | ||
| 97 | # Get number of energy bins | 100 | # Get number of energy bins |
| 98 | self._enumbins = self["enumbins"].integer() | 101 | self._enumbins = self["enumbins"].integer() |
| 99 | 102 |
test/data/obs_stacked.xml
0 → 100644
| 1 | +<?xml version="1.0" encoding="UTF-8" standalone="no"?> | ||
| 2 | +<observation_list title="observation list"> | ||
| 3 | + <observation name="Crab" id="00001" instrument="CTA"> | ||
| 4 | + <parameter name="CountsCube" file="data/crab_cntmap.fits"/> | ||
| 5 | + <parameter name="ExposureCube" file="data/crab_expcube.fits"/> | ||
| 6 | + <parameter name="PsfCube" file="data/crab_psfcube.fits"/> | ||
| 7 | + <parameter name="BkgCube" file="data/crab_bkgcube.fits"/> | ||
| 8 | + </observation> | ||
| 9 | +</observation_list> |
test/test_cspull.py
0 → 100755
| 1 | +#! /usr/bin/env python | ||
| 2 | +# ========================================================================== | ||
| 3 | +# This scripts performs unit tests for the cspull script. | ||
| 4 | +# | ||
| 5 | +# Copyright (C) 2016 Juergen Knoedlseder | ||
| 6 | +# | ||
| 7 | +# This program is free software: you can redistribute it and/or modify | ||
| 8 | +# it under the terms of the GNU General Public License as published by | ||
| 9 | +# the Free Software Foundation, either version 3 of the License, or | ||
| 10 | +# (at your option) any later version. | ||
| 11 | +# | ||
| 12 | +# This program is distributed in the hope that it will be useful, | ||
| 13 | +# but WITHOUT ANY WARRANTY; without even the implied warranty of | ||
| 14 | +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | ||
| 15 | +# GNU General Public License for more details. | ||
| 16 | +# | ||
| 17 | +# You should have received a copy of the GNU General Public License | ||
| 18 | +# along with this program. If not, see <http://www.gnu.org/licenses/>. | ||
| 19 | +# | ||
| 20 | +# ========================================================================== | ||
| 21 | +import os | ||
| 22 | +import gammalib | ||
| 23 | +import cscripts | ||
| 24 | + | ||
| 25 | + | ||
| 26 | +# ============================ # | ||
| 27 | +# Test class for cspull script # | ||
| 28 | +# ============================ # | ||
| 29 | +class Test(gammalib.GPythonTestSuite): | ||
| 30 | + """ | ||
| 31 | + Test class for cspull script. | ||
| 32 | + | ||
| 33 | + This test class makes unit tests for the cspull script by using it | ||
| 34 | + from the command line and from Python. | ||
| 35 | + """ | ||
| 36 | + | ||
| 37 | + # Constructor | ||
| 38 | + def __init__(self): | ||
| 39 | + """ | ||
| 40 | + Constructor. | ||
| 41 | + """ | ||
| 42 | + # Call base class constructor | ||
| 43 | + gammalib.GPythonTestSuite.__init__(self) | ||
| 44 | + | ||
| 45 | + # Return | ||
| 46 | + return | ||
| 47 | + | ||
| 48 | + # Set test functions | ||
| 49 | + def set(self): | ||
| 50 | + """ | ||
| 51 | + Set all test functions. | ||
| 52 | + """ | ||
| 53 | + # Set test name | ||
| 54 | + self.name("cspull") | ||
| 55 | + | ||
| 56 | + # Append tests | ||
| 57 | + self.append(self._test_cmd, "Test cspull on command line") | ||
| 58 | + self.append(self._test_python, "Test cspull from Python") | ||
| 59 | + | ||
| 60 | + # Return | ||
| 61 | + return | ||
| 62 | + | ||
| 63 | + # Test cspull on command line | ||
| 64 | + def _test_cmd(self): | ||
| 65 | + """ | ||
| 66 | + Test cspull on the command line. | ||
| 67 | + """ | ||
| 68 | + # Kluge to set the command (installed version has no README file) | ||
| 69 | + if os.path.isfile("README"): | ||
| 70 | + cspull = "../cscripts/cspull.py" | ||
| 71 | + else: | ||
| 72 | + cspull = "cspull" | ||
| 73 | + | ||
| 74 | + # Setup cspull command | ||
| 75 | + cmd = cspull+' inmodel="data/crab.xml"'+ \ | ||
| 76 | + ' outfile="cspull_cmd1.dat"'+ \ | ||
| 77 | + ' ntrials=3 caldb="prod2" irf="South_0.5h"'+ \ | ||
| 78 | + ' ra=83.6331 dec=22.0145 emin=0.1 emax=100.0'+ \ | ||
| 79 | + ' enumbins=0 tmax=1800.0 deadc=0.95 rad=5.0'+ \ | ||
| 80 | + ' npix=200 binsz=0.05'+ \ | ||
| 81 | + ' logfile="cspull_cmd1.log" chatter=1' | ||
| 82 | + | ||
| 83 | + # Execute cspull, make sure we catch any exception | ||
| 84 | + try: | ||
| 85 | + rc = os.system(cmd+" >/dev/null 2>&1") | ||
| 86 | + except: | ||
| 87 | + pass | ||
| 88 | + | ||
| 89 | + # Check if execution was successful | ||
| 90 | + self.test_assert(rc == 0, | ||
| 91 | + "Successful cspull execution on command line") | ||
| 92 | + | ||
| 93 | + # Check pull distribution file | ||
| 94 | + self._check_pull_file("cspull_cmd1.dat") | ||
| 95 | + | ||
| 96 | + # Setup cspull command | ||
| 97 | + cmd = cspull+' inmodel="model_that_does_not_exist.xml"'+ \ | ||
| 98 | + ' outfile="cspull_cmd1.dat"'+ \ | ||
| 99 | + ' ntrials=3 caldb="prod2" irf="South_0.5h"'+ \ | ||
| 100 | + ' ra=83.6331 dec=22.0145 emin=0.1 emax=100.0'+ \ | ||
| 101 | + ' enumbins=0 tmax=1800.0 deadc=0.95 rad=5.0'+ \ | ||
| 102 | + ' npix=200 binsz=0.05'+ \ | ||
| 103 | + ' logfile="cspull_cmd2.log"' | ||
| 104 | + | ||
| 105 | + # Execute cspull, make sure we catch any exception | ||
| 106 | + try: | ||
| 107 | + rc = os.system(cmd+" >/dev/null 2>&1") | ||
| 108 | + except: | ||
| 109 | + pass | ||
| 110 | + | ||
| 111 | + # Check if execution failed | ||
| 112 | + self.test_assert(rc != 0, | ||
| 113 | + "Failure of cspull execution on command line") | ||
| 114 | + | ||
| 115 | + # Return | ||
| 116 | + return | ||
| 117 | + | ||
| 118 | + # Test cspull from Python | ||
| 119 | + def _test_python(self): | ||
| 120 | + """ | ||
| 121 | + Test cspull from Python. | ||
| 122 | + """ | ||
| 123 | + # Set-up unbinned cspull | ||
| 124 | + pull = cscripts.cspull() | ||
| 125 | + pull["inmodel"] = "data/crab.xml" | ||
| 126 | + pull["outfile"] = "cspull_py1.dat" | ||
| 127 | + pull["ntrials"] = 3 | ||
| 128 | + pull["caldb"] = "prod2" | ||
| 129 | + pull["irf"] = "South_0.5h" | ||
| 130 | + pull["ra"] = 83.6331 | ||
| 131 | + pull["dec"] = 22.0145 | ||
| 132 | + pull["emin"] = 0.1 | ||
| 133 | + pull["emax"] = 100.0 | ||
| 134 | + pull["enumbins"] = 0 | ||
| 135 | + pull["tmax"] = 1800.0 | ||
| 136 | + pull["deadc"] = 0.95 | ||
| 137 | + pull["rad"] = 5.0 | ||
| 138 | + pull["logfile"] = "cspull_py1.log" | ||
| 139 | + pull["chatter"] = 2 | ||
| 140 | + | ||
| 141 | + # Run cspull script | ||
| 142 | + pull.logFileOpen() # Make sure we get a log file | ||
| 143 | + pull.run() | ||
| 144 | + #pull.save() | ||
| 145 | + | ||
| 146 | + # Check pull distribution file | ||
| 147 | + self._check_pull_file("cspull_py1.dat") | ||
| 148 | + | ||
| 149 | + # Set-up binned cspull | ||
| 150 | + pull = cscripts.cspull() | ||
| 151 | + pull["inmodel"] = "data/crab.xml" | ||
| 152 | + pull["outfile"] = "cspull_py2.dat" | ||
| 153 | + pull["ntrials"] = 3 | ||
| 154 | + pull["caldb"] = "prod2" | ||
| 155 | + pull["irf"] = "South_0.5h" | ||
| 156 | + pull["ra"] = 83.6331 | ||
| 157 | + pull["dec"] = 22.0145 | ||
| 158 | + pull["emin"] = 0.1 | ||
| 159 | + pull["emax"] = 100.0 | ||
| 160 | + pull["enumbins"] = 10 | ||
| 161 | + pull["tmax"] = 1800.0 | ||
| 162 | + pull["deadc"] = 0.95 | ||
| 163 | + pull["rad"] = 5.0 | ||
| 164 | + pull["npix"] = 100 | ||
| 165 | + pull["binsz"] = 0.02 | ||
| 166 | + pull["coordsys"] = "CEL" | ||
| 167 | + pull["proj"] = "TAN" | ||
| 168 | + pull["logfile"] = "cspull_py2.log" | ||
| 169 | + pull["chatter"] = 3 | ||
| 170 | + | ||
| 171 | + # Execute cspull script | ||
| 172 | + pull.execute() | ||
| 173 | + | ||
| 174 | + # Check pull distribution file | ||
| 175 | + self._check_pull_file("cspull_py2.dat") | ||
| 176 | + | ||
| 177 | + # Set-up cspull from event list | ||
| 178 | + pull = cscripts.cspull() | ||
| 179 | + pull["inobs"] = "data/crab_events.fits" | ||
| 180 | + pull["inmodel"] = "data/crab.xml" | ||
| 181 | + pull["outfile"] = "cspull_py3.dat" | ||
| 182 | + pull["ntrials"] = 3 | ||
| 183 | + pull["caldb"] = "prod2" | ||
| 184 | + pull["irf"] = "South_0.5h" | ||
| 185 | + pull["enumbins"] = 0 | ||
| 186 | + pull["logfile"] = "cspull_py3.log" | ||
| 187 | + pull["chatter"] = 4 | ||
| 188 | + | ||
| 189 | + # Execute cspull script | ||
| 190 | + pull.execute() | ||
| 191 | + | ||
| 192 | + # Check pull distribution file | ||
| 193 | + self._check_pull_file("cspull_py3.dat") | ||
| 194 | + | ||
| 195 | + # Build observation container with unbinned observation | ||
| 196 | + cta = gammalib.GCTAObservation("data/crab_events.fits") | ||
| 197 | + obs = gammalib.GObservations() | ||
| 198 | + obs.append(cta) | ||
| 199 | + | ||
| 200 | + # Set-up cspull from observation container with unbinned observation | ||
| 201 | + pull = cscripts.cspull(obs) | ||
| 202 | + pull["inmodel"] = "data/crab.xml" | ||
| 203 | + pull["outfile"] = "cspull_py4.dat" | ||
| 204 | + pull["ntrials"] = 3 | ||
| 205 | + pull["caldb"] = "prod2" | ||
| 206 | + pull["irf"] = "South_0.5h" | ||
| 207 | + pull["enumbins"] = 0 | ||
| 208 | + pull["logfile"] = "cspull_py4.log" | ||
| 209 | + pull["chatter"] = 4 | ||
| 210 | + | ||
| 211 | + # Execute cspull script | ||
| 212 | + pull.execute() | ||
| 213 | + | ||
| 214 | + # Check pull distribution file | ||
| 215 | + self._check_pull_file("cspull_py4.dat") | ||
| 216 | + | ||
| 217 | + # Set-up stacked cspull | ||
| 218 | + pull = cscripts.cspull() | ||
| 219 | + pull["inobs"] = "data/obs_stacked.xml" | ||
| 220 | + pull["inmodel"] = "data/crab_bkgcube.xml" | ||
| 221 | + pull["outfile"] = "cspull_py5.dat" | ||
| 222 | + pull["ntrials"] = 3 | ||
| 223 | + pull["caldb"] = "prod2" | ||
| 224 | + pull["irf"] = "South_0.5h" | ||
| 225 | + pull["enumbins"] = 0 | ||
| 226 | + pull["logfile"] = "cspull_py5.log" | ||
| 227 | + pull["chatter"] = 4 | ||
| 228 | + | ||
| 229 | + # Execute cspull script | ||
| 230 | + pull.execute() | ||
| 231 | + | ||
| 232 | + # Check pull distribution file | ||
| 233 | + self._check_pull_file("cspull_py5.dat") | ||
| 234 | + | ||
| 235 | + # Return | ||
| 236 | + return | ||
| 237 | + | ||
| 238 | + # Check pull file | ||
| 239 | + def _check_pull_file(self, filename): | ||
| 240 | + """ | ||
| 241 | + Check pull file. | ||
| 242 | + """ | ||
| 243 | + # Open pull file as CSV file | ||
| 244 | + pulls = gammalib.GCsv(filename) | ||
| 245 | + | ||
| 246 | + # Check dimensions | ||
| 247 | + self.test_value(pulls.nrows(), 4, | ||
| 248 | + 'Check for 4 rows in pull file') | ||
| 249 | + | ||
| 250 | + # Return | ||
| 251 | + return |
test/test_python_cscripts.py
| @@ -30,6 +30,7 @@ import test_csmodelmerge | @@ -30,6 +30,7 @@ import test_csmodelmerge | ||
| 30 | import test_csobs2caldb | 30 | import test_csobs2caldb |
| 31 | import test_csobsdef | 31 | import test_csobsdef |
| 32 | import test_csobsinfo | 32 | import test_csobsinfo |
| 33 | +import test_cspull | ||
| 33 | import test_csfindobs | 34 | import test_csfindobs |
| 34 | import test_csiactcopy | 35 | import test_csiactcopy |
| 35 | import test_csiactdata | 36 | import test_csiactdata |
| @@ -89,6 +90,7 @@ def test(installed=False, debug=False): | @@ -89,6 +90,7 @@ def test(installed=False, debug=False): | ||
| 89 | suite_csobs2caldb = test_csobs2caldb.Test() | 90 | suite_csobs2caldb = test_csobs2caldb.Test() |
| 90 | suite_csobsdef = test_csobsdef.Test() | 91 | suite_csobsdef = test_csobsdef.Test() |
| 91 | suite_csobsinfo = test_csobsinfo.Test() | 92 | suite_csobsinfo = test_csobsinfo.Test() |
| 93 | + suite_cspull = test_cspull.Test() | ||
| 92 | 94 | ||
| 93 | # Setup unit tests | 95 | # Setup unit tests |
| 94 | suite_cscaldb.set() | 96 | suite_cscaldb.set() |
| @@ -98,6 +100,7 @@ def test(installed=False, debug=False): | @@ -98,6 +100,7 @@ def test(installed=False, debug=False): | ||
| 98 | suite_csobs2caldb.set() | 100 | suite_csobs2caldb.set() |
| 99 | suite_csobsdef.set() | 101 | suite_csobsdef.set() |
| 100 | suite_csobsinfo.set() | 102 | suite_csobsinfo.set() |
| 103 | + suite_cspull.set() | ||
| 101 | 104 | ||
| 102 | # Append tests to container | 105 | # Append tests to container |
| 103 | suites.append(suite_cscaldb) | 106 | suites.append(suite_cscaldb) |
| @@ -107,6 +110,7 @@ def test(installed=False, debug=False): | @@ -107,6 +110,7 @@ def test(installed=False, debug=False): | ||
| 107 | suites.append(suite_csobs2caldb) | 110 | suites.append(suite_csobs2caldb) |
| 108 | suites.append(suite_csobsdef) | 111 | suites.append(suite_csobsdef) |
| 109 | suites.append(suite_csobsinfo) | 112 | suites.append(suite_csobsinfo) |
| 113 | + suites.append(suite_cspull) | ||
| 110 | 114 | ||
| 111 | # Append tests for Python 2.6+ (the IACT cscripts depend on the json | 115 | # Append tests for Python 2.6+ (the IACT cscripts depend on the json |
| 112 | # module which is only available since Python 2.6+ | 116 | # module which is only available since Python 2.6+ |