Olga Sergijenko / ctools

Commit c65f2ac943105bd49220763672a2e5e8334d0aaf

Authored by Jürgen Knödlseder
1 parent 7c7ef2af

Update ctools reference manual

Inline Side-by-side
Showing 63 changed files with 391 additions and 312 deletions
cscripts/cscaldb.par
  View file @c65f2ac
@@ -18,6 +18,6 @@ @@ -18,6 +18,6 @@
18 #==================== 18 #====================
19 chatter, i, h, 2,0,4, "Chattiness of output" 19 chatter, i, h, 2,0,4, "Chattiness of output"
20 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 20 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
21 -debug, b, h, no,,, "Debugging mode activated" 21 +debug, b, h, no,,, "Activate debugging mode?"
22 mode, s, h, ql,,, "Mode of automatic parameters" 22 mode, s, h, ql,,, "Mode of automatic parameters"
23 logfile, f, h, cscaldb.log,,, "Log filename" 23 logfile, f, h, cscaldb.log,,, "Log filename"
cscripts/csebins.par
  View file @c65f2ac
@@ -34,6 +34,6 @@ bkgthres, r, h, 0.5,,, "Fractional background rate change threshold" @@ -34,6 +34,6 @@ bkgthres, r, h, 0.5,,, "Fractional background rate change threshold"
34 #==================== 34 #====================
35 chatter, i, h, 2,0,4, "Chattiness of output" 35 chatter, i, h, 2,0,4, "Chattiness of output"
36 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 36 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
37 -debug, b, h, no,,, "Debugging mode activated" 37 +debug, b, h, no,,, "Activate debugging mode?"
38 mode, s, h, ql,,, "Mode of automatic parameters" 38 mode, s, h, ql,,, "Mode of automatic parameters"
39 logfile, f, h, csebins.log,,, "Log filename" 39 logfile, f, h, csebins.log,,, "Log filename"
cscripts/csfindobs.par
  View file @c65f2ac
@@ -35,7 +35,7 @@ master_indx, s, h, master.json,,, "Name of master index file" @@ -35,7 +35,7 @@ master_indx, s, h, master.json,,, "Name of master index file"
35 #==================== 35 #====================
36 chatter, i, h, 2,0,4, "Chattiness of output" 36 chatter, i, h, 2,0,4, "Chattiness of output"
37 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 37 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
38 -debug, b, h, no,,, "Debugging mode activated" 38 +debug, b, h, no,,, "Activate debugging mode?"
39 mode, s, h, ql,,, "Mode of automatic parameters" 39 mode, s, h, ql,,, "Mode of automatic parameters"
40 logfile, f, h, csfindobs.log,,, "Log filename" 40 logfile, f, h, csfindobs.log,,, "Log filename"
41 41
cscripts/csiactcopy.par
  View file @c65f2ac
@@ -26,6 +26,6 @@ outpath, s, a, /path/to/fits,,, "Destination path of FITS data" @@ -26,6 +26,6 @@ outpath, s, a, /path/to/fits,,, "Destination path of FITS data"
26 #==================== 26 #====================
27 chatter, i, h, 2,0,4, "Chattiness of output" 27 chatter, i, h, 2,0,4, "Chattiness of output"
28 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 28 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
29 -debug, b, h, no,,, "Debugging mode activated" 29 +debug, b, h, no,,, "Activate debugging mode?"
30 mode, s, h, ql,,, "Mode of automatic parameters" 30 mode, s, h, ql,,, "Mode of automatic parameters"
31 logfile, f, h, csiactcopy.log,,, "Log filename" 31 logfile, f, h, csiactcopy.log,,, "Log filename"
cscripts/csiactdata.par
  View file @c65f2ac
@@ -24,7 +24,7 @@ master_indx, s, h, master.json,,, "Name of master index file" @@ -24,7 +24,7 @@ master_indx, s, h, master.json,,, "Name of master index file"
24 #==================== 24 #====================
25 chatter, i, h, 2,0,4, "Chattiness of output" 25 chatter, i, h, 2,0,4, "Chattiness of output"
26 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 26 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
27 -debug, b, h, no,,, "Debugging mode activated" 27 +debug, b, h, no,,, "Activate debugging mode?"
28 mode, s, h, ql,,, "Mode of automatic parameters" 28 mode, s, h, ql,,, "Mode of automatic parameters"
29 logfile, f, h, csiactdata.log,,, "Log filename" 29 logfile, f, h, csiactdata.log,,, "Log filename"
30 30
cscripts/csiactobs.par
  View file @c65f2ac
@@ -47,7 +47,7 @@ bkg_range_factor, r, h, 100.0,,, "Factor to determine range of background normal @@ -47,7 +47,7 @@ bkg_range_factor, r, h, 100.0,,, "Factor to determine range of background normal
47 #==================== 47 #====================
48 chatter, i, h, 2,0,4, "Chattiness of output" 48 chatter, i, h, 2,0,4, "Chattiness of output"
49 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 49 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
50 -debug, b, h, no,,, "Debugging mode activated" 50 +debug, b, h, no,,, "Activate debugging mode?"
51 mode, s, h, ql,,, "Mode of automatic parameters" 51 mode, s, h, ql,,, "Mode of automatic parameters"
52 logfile, f, h, csiactobs.log,,, "Log filename" 52 logfile, f, h, csiactobs.log,,, "Log filename"
53 53
cscripts/cslightcrv.par
  View file @c65f2ac
@@ -64,7 +64,7 @@ fix_bkg, b, h, no,,, "Fix background model parameters?" @@ -64,7 +64,7 @@ fix_bkg, b, h, no,,, "Fix background model parameters?"
64 publish, b, h, no,,, "Publish light curve on VO Hub?" 64 publish, b, h, no,,, "Publish light curve on VO Hub?"
65 chatter, i, h, 2,0,4, "Chattiness of output" 65 chatter, i, h, 2,0,4, "Chattiness of output"
66 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 66 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
67 -debug, b, h, no,,, "Debugging mode activated" 67 +debug, b, h, no,,, "Activate debugging mode?"
68 mode, s, h, ql,,, "Mode of automatic parameters" 68 mode, s, h, ql,,, "Mode of automatic parameters"
69 logfile, f, h, cslightcrv.log,,, "Log filename" 69 logfile, f, h, cslightcrv.log,,, "Log filename"
70 70
cscripts/csmodelinfo.par
  View file @c65f2ac
@@ -39,6 +39,6 @@ fixed_color, s, h, magenta,,, "Color for source without free parameters (any D @@ -39,6 +39,6 @@ fixed_color, s, h, magenta,,, "Color for source without free parameters (any D
39 #==================== 39 #====================
40 chatter, i, h, 2,0,4, "Chattiness of output" 40 chatter, i, h, 2,0,4, "Chattiness of output"
41 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 41 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
42 -debug, b, h, no,,, "Debugging mode activated" 42 +debug, b, h, no,,, "Activate debugging mode?"
43 mode, s, h, ql,,, "Mode of automatic parameters" 43 mode, s, h, ql,,, "Mode of automatic parameters"
44 logfile, f, h, csmodelinfo.log,,, "Log filename" 44 logfile, f, h, csmodelinfo.log,,, "Log filename"
cscripts/csmodelmerge.par
  View file @c65f2ac
@@ -24,6 +24,6 @@ outmodel, f, a, NONE,,, "Output model definition XML file" @@ -24,6 +24,6 @@ outmodel, f, a, NONE,,, "Output model definition XML file"
24 #==================== 24 #====================
25 chatter, i, h, 2,0,4, "Chattiness of output" 25 chatter, i, h, 2,0,4, "Chattiness of output"
26 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 26 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
27 -debug, b, h, no,,, "Debugging mode activated" 27 +debug, b, h, no,,, "Activate debugging mode?"
28 mode, s, h, ql,,, "Mode of automatic parameters" 28 mode, s, h, ql,,, "Mode of automatic parameters"
29 logfile, f, h, csmodelmerge.log,,, "Log filename" 29 logfile, f, h, csmodelmerge.log,,, "Log filename"
cscripts/csmodelselect.par
  View file @c65f2ac
@@ -36,6 +36,6 @@ fit_shape, b, h, no,,, "Fit source shapes?" @@ -36,6 +36,6 @@ fit_shape, b, h, no,,, "Fit source shapes?"
36 #==================== 36 #====================
37 chatter, i, h, 2,0,4, "Chattiness of output" 37 chatter, i, h, 2,0,4, "Chattiness of output"
38 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 38 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
39 -debug, b, h, no,,, "Debugging mode activated" 39 +debug, b, h, no,,, "Activate debugging mode?"
40 mode, s, h, ql,,, "Mode of automatic parameters" 40 mode, s, h, ql,,, "Mode of automatic parameters"
41 logfile, f, h, csmodelselect.log,,, "Log filename" 41 logfile, f, h, csmodelselect.log,,, "Log filename"
cscripts/csmodelsois.par
  View file @c65f2ac
@@ -50,6 +50,6 @@ glat, r, a, -5.80,-90,90, "Galactic latitude of image center (in degrees)" @@ -50,6 +50,6 @@ glat, r, a, -5.80,-90,90, "Galactic latitude of image center (in degrees)"
50 publish, b, h, no,,, "Publish map cube on VO Hub?" 50 publish, b, h, no,,, "Publish map cube on VO Hub?"
51 chatter, i, h, 2,0,4, "Chattiness of output" 51 chatter, i, h, 2,0,4, "Chattiness of output"
52 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 52 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
53 -debug, b, h, no,,, "Debugging mode activated"  
54 -mode, s, h, "ql",,, "Mode of automatic parameters"  
55 -logfile, f, h, "csmodelsois.log",,, "Log filename" 53 +debug, b, h, no,,, "Activate debugging mode?"
  54 +mode, s, h, ql,,, "Mode of automatic parameters"
  55 +logfile, f, h, csmodelsois.log,,, "Log filename"
cscripts/csobs2caldb.par
  View file @c65f2ac
@@ -28,6 +28,6 @@ index, i, h, 0,,, "Index of observation to be used from XML file" @@ -28,6 +28,6 @@ index, i, h, 0,,, "Index of observation to be used from XML file"
28 #==================== 28 #====================
29 chatter, i, h, 2,0,4, "Chattiness of output" 29 chatter, i, h, 2,0,4, "Chattiness of output"
30 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 30 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
31 -debug, b, h, no,,, "Debugging mode activated" 31 +debug, b, h, no,,, "Activate debugging mode?"
32 mode, s, h, ql,,, "Mode of automatic parameters" 32 mode, s, h, ql,,, "Mode of automatic parameters"
33 logfile, f, h, csobs2caldb.log,,, "Log filename" 33 logfile, f, h, csobs2caldb.log,,, "Log filename"
cscripts/csobsdef.par
  View file @c65f2ac
@@ -36,6 +36,6 @@ deadc, r, h, 0.98,,, "Deadtime correction factor" @@ -36,6 +36,6 @@ deadc, r, h, 0.98,,, "Deadtime correction factor"
36 #==================== 36 #====================
37 chatter, i, h, 2,0,4, "Chattiness of output" 37 chatter, i, h, 2,0,4, "Chattiness of output"
38 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 38 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
39 -debug, b, h, no,,, "Debugging mode activated" 39 +debug, b, h, no,,, "Activate debugging mode?"
40 mode, s, h, ql,,, "Mode of automatic parameters" 40 mode, s, h, ql,,, "Mode of automatic parameters"
41 logfile, f, h, csobsdef.log,,, "Log filename" 41 logfile, f, h, csobsdef.log,,, "Log filename"
cscripts/csobsinfo.par
  View file @c65f2ac
@@ -31,6 +31,6 @@ dec, r, a, 0.0,,, "Target Declination (deg)") @@ -31,6 +31,6 @@ dec, r, a, 0.0,,, "Target Declination (deg)")
31 #==================== 31 #====================
32 chatter, i, h, 2,0,4, "Chattiness of output" 32 chatter, i, h, 2,0,4, "Chattiness of output"
33 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 33 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
34 -debug, b, h, no,,, "Debugging mode activated" 34 +debug, b, h, no,,, "Activate debugging mode?"
35 mode, s, h, ql,,, "Mode of automatic parameters" 35 mode, s, h, ql,,, "Mode of automatic parameters"
36 logfile, f, h, csobsinfo.log,,, "Log filename" 36 logfile, f, h, csobsinfo.log,,, "Log filename"
cscripts/csobsselect.par
  View file @c65f2ac
@@ -37,6 +37,6 @@ height, r, a, 10.0,0,180, "Height of selection box (deg)" @@ -37,6 +37,6 @@ height, r, a, 10.0,0,180, "Height of selection box (deg)"
37 #==================== 37 #====================
38 chatter, i, h, 2,0,4, "Chattiness of output" 38 chatter, i, h, 2,0,4, "Chattiness of output"
39 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 39 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
40 -debug, b, h, no,,, "Debugging mode activated" 40 +debug, b, h, no,,, "Activate debugging mode?"
41 mode, s, h, ql,,, "Mode of automatic parameters" 41 mode, s, h, ql,,, "Mode of automatic parameters"
42 logfile, f, h, csobsselect.log,,, "Log filename" 42 logfile, f, h, csobsselect.log,,, "Log filename"
cscripts/csphagen.par
  View file @c65f2ac
@@ -26,10 +26,10 @@ prefix, s, h, onoff,,, "Prefix for output files" @@ -26,10 +26,10 @@ prefix, s, h, onoff,,, "Prefix for output files"
26 # 26 #
27 # Script parameters 27 # Script parameters
28 #================== 28 #==================
29 -emin, r, a, 0.1,,, "Lower energy limit (TeV)"  
30 -emax, r, a, 100.0,,, "Upper energy limit (TeV)" 29 +ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
  30 +emin, r, a, 0.1,,, "Start value for first energy bin in TeV"
  31 +emax, r, a, 100.0,,, "Stop value for last energy bin in TeV"
31 enumbins, i, a, 120,,, "Number of energy bins" 32 enumbins, i, a, 120,,, "Number of energy bins"
32 -ebinalg, s, a, LOG,LIN|LOG|FILE,, "Binning algorithm"  
33 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition" 33 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
34 srcshape, s, h, CIRCLE,CIRCLE,, "Shape of the source region" 34 srcshape, s, h, CIRCLE,CIRCLE,, "Shape of the source region"
35 coordsys, s, a, CEL,CEL|GAL,, "Coordinate system (CEL - celestial, GAL - galactic)" 35 coordsys, s, a, CEL,CEL|GAL,, "Coordinate system (CEL - celestial, GAL - galactic)"
@@ -53,6 +53,6 @@ etruebins, i, h, 30,,, "Number of bins per decade for true energy bins" @@ -53,6 +53,6 @@ etruebins, i, h, 30,,, "Number of bins per decade for true energy bins"
53 #==================== 53 #====================
54 chatter, i, h, 2,0,4, "Chattiness of output" 54 chatter, i, h, 2,0,4, "Chattiness of output"
55 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 55 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
56 -debug, b, h, no,,, "Debugging mode activated" 56 +debug, b, h, no,,, "Activate debugging mode?"
57 mode, s, h, ql,,, "Mode of automatic parameters" 57 mode, s, h, ql,,, "Mode of automatic parameters"
58 logfile, f, h, csphagen.log,,, "Log filename" 58 logfile, f, h, csphagen.log,,, "Log filename"
cscripts/csphasecrv.par
  View file @c65f2ac
@@ -58,7 +58,7 @@ statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic" @@ -58,7 +58,7 @@ statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic"
58 publish, b, h, no,,, "Publish phase curve on VO Hub?" 58 publish, b, h, no,,, "Publish phase curve on VO Hub?"
59 chatter, i, h, 2,0,4, "Chattiness of output" 59 chatter, i, h, 2,0,4, "Chattiness of output"
60 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 60 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
61 -debug, b, h, no,,, "Debugging mode activated" 61 +debug, b, h, no,,, "Activate debugging mode?"
62 mode, s, h, ql,,, "Mode of automatic parameters" 62 mode, s, h, ql,,, "Mode of automatic parameters"
63 logfile, f, h, csphasecrv.log,,, "Log filename" 63 logfile, f, h, csphasecrv.log,,, "Log filename"
64 64
cscripts/cspull.par
  View file @c65f2ac
@@ -51,6 +51,6 @@ seed, i, h, 1,,, "Initial random number generator seed" @@ -51,6 +51,6 @@ seed, i, h, 1,,, "Initial random number generator seed"
51 #==================== 51 #====================
52 chatter, i, h, 2,0,4, "Chattiness of output" 52 chatter, i, h, 2,0,4, "Chattiness of output"
53 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 53 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
54 -debug, b, h, no,,, "Debugging mode activated" 54 +debug, b, h, no,,, "Activate debugging mode?"
55 mode, s, h, ql,,, "Mode of automatic parameters" 55 mode, s, h, ql,,, "Mode of automatic parameters"
56 logfile, f, h, cspull.log,,, "Log filename" 56 logfile, f, h, cspull.log,,, "Log filename"
cscripts/csresmap.par
  View file @c65f2ac
@@ -31,7 +31,7 @@ outmap, f, a, resmap.fits,,, "Output residual map file" @@ -31,7 +31,7 @@ outmap, f, a, resmap.fits,,, "Output residual map file"
31 # 31 #
32 # Script parameters 32 # Script parameters
33 #================== 33 #==================
34 -ebinalg, s, h, LOG,LIN|LOG|FILE,, "Binning algorithm" 34 +ebinalg, s, h, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
35 emin, r, a, 0.1,,, "Lower energy limit (TeV)" 35 emin, r, a, 0.1,,, "Lower energy limit (TeV)"
36 emax, r, a, 100.0,,, "Upper energy limit (TeV)" 36 emax, r, a, 100.0,,, "Upper energy limit (TeV)"
37 enumbins, i, h, 20,,, "Number of model cube energy bins" 37 enumbins, i, h, 20,,, "Number of model cube energy bins"
@@ -51,6 +51,6 @@ algorithm, s, a, SIGNIFICANCE,SUB|SUBDIV|SUBDIVSQRT|SIGNIFICANCE,, "Residual map @@ -51,6 +51,6 @@ algorithm, s, a, SIGNIFICANCE,SUB|SUBDIV|SUBDIVSQRT|SIGNIFICANCE,, "Residual map
51 publish, b, h, no,,, "Publish residual map on VO Hub?" 51 publish, b, h, no,,, "Publish residual map on VO Hub?"
52 chatter, i, h, 2,0,4, "Chattiness of output" 52 chatter, i, h, 2,0,4, "Chattiness of output"
53 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 53 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
54 -debug, b, h, no,,, "Debugging mode activated" 54 +debug, b, h, no,,, "Activate debugging mode?"
55 mode, s, h, ql,,, "Mode of automatic parameters" 55 mode, s, h, ql,,, "Mode of automatic parameters"
56 logfile, f, h, csresmap.log,,, "Log filename" 56 logfile, f, h, csresmap.log,,, "Log filename"
cscripts/csresspec.par
  View file @c65f2ac
@@ -34,9 +34,9 @@ outfile, f, a, resspec.fits,,, "Output residual spectrum file" @@ -34,9 +34,9 @@ outfile, f, a, resspec.fits,,, "Output residual spectrum file"
34 statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic" 34 statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic"
35 components,b, h, no,,, "Calculate model for individual components?" 35 components,b, h, no,,, "Calculate model for individual components?"
36 ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins" 36 ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
37 -emin, r, a, 0.1,,, "Lower energy limit (TeV)"  
38 -emax, r, a, 100.0,,, "Upper energy limit (TeV)"  
39 -enumbins, i, a, 20,,, "Number of model cube energy bins" 37 +emin, r, a, 0.1,,, "Start value for first energy bin in TeV"
  38 +emax, r, a, 100.0,,, "Stop value for last energy bin in TeV"
  39 +enumbins, i, a, 20,1,200, "Number of energy bins"
40 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition" 40 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
41 stack, b, a, no,,, "Stack observations?" 41 stack, b, a, no,,, "Stack observations?"
42 coordsys, s, a, CEL,CEL|GAL,, "Coordinate System" 42 coordsys, s, a, CEL,CEL|GAL,, "Coordinate System"
@@ -59,6 +59,6 @@ algorithm, s, a, SIGNIFICANCE,SUB|SUBDIV|SUBDIVSQRT|SIGNIFICANCE,, "Residuals co @@ -59,6 +59,6 @@ algorithm, s, a, SIGNIFICANCE,SUB|SUBDIV|SUBDIVSQRT|SIGNIFICANCE,, "Residuals co
59 publish, b, h, no,,, "Publish residual map on VO Hub?" 59 publish, b, h, no,,, "Publish residual map on VO Hub?"
60 chatter, i, h, 2,0,4, "Chattiness of output" 60 chatter, i, h, 2,0,4, "Chattiness of output"
61 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 61 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
62 -debug, b, h, no,,, "Debugging mode activated" 62 +debug, b, h, no,,, "Activate debugging mode?"
63 mode, s, h, ql,,, "Mode of automatic parameters" 63 mode, s, h, ql,,, "Mode of automatic parameters"
64 logfile, f, h, csresspec.log,,, "Log filename" 64 logfile, f, h, csresspec.log,,, "Log filename"
cscripts/csroot2caldb.par
  View file @c65f2ac
@@ -41,6 +41,6 @@ bgdinfill, b, h, no,,, "Infill of background template?" @@ -41,6 +41,6 @@ bgdinfill, b, h, no,,, "Infill of background template?"
41 #==================== 41 #====================
42 chatter, i, h, 2,0,4, "Chattiness of output" 42 chatter, i, h, 2,0,4, "Chattiness of output"
43 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 43 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
44 -debug, b, h, no,,, "Debugging mode activated" 44 +debug, b, h, no,,, "Activate debugging mode?"
45 mode, s, h, ql,,, "Mode of automatic parameters" 45 mode, s, h, ql,,, "Mode of automatic parameters"
46 logfile, f, h, csroot2caldb.log,,, "Log filename" 46 logfile, f, h, csroot2caldb.log,,, "Log filename"
cscripts/cssens.par
  View file @c65f2ac
@@ -33,7 +33,7 @@ duration, r, a, 180000.0,,, "Effective exposure time (s)" @@ -33,7 +33,7 @@ duration, r, a, 180000.0,,, "Effective exposure time (s)"
33 rad, r, a, 5.0,,, "Radius of ROI (deg)" 33 rad, r, a, 5.0,,, "Radius of ROI (deg)"
34 emin, r, a, 0.03163,,, "Lower energy limit (TeV)" 34 emin, r, a, 0.03163,,, "Lower energy limit (TeV)"
35 emax, r, a, 125.8925,,, "Upper energy limit (TeV)" 35 emax, r, a, 125.8925,,, "Upper energy limit (TeV)"
36 -bins, i, a, 18,,, "Number of energy bins for differential sensitivity computation" 36 +bins, i, a, 18,,, "Number of energy bins for sensitivity computation"
37 enumbins, i, h, 0,,, "Number of energy bins for binned analysis (0=unbinned)" 37 enumbins, i, h, 0,,, "Number of energy bins for binned analysis (0=unbinned)"
38 npix, i, h, 200,,, "Number of pixels for binned analysis" 38 npix, i, h, 200,,, "Number of pixels for binned analysis"
39 binsz, r, h, 0.05,,, "Pixel size for binned analysis (deg/pixel)" 39 binsz, r, h, 0.05,,, "Pixel size for binned analysis (deg/pixel)"
@@ -47,7 +47,7 @@ statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic" @@ -47,7 +47,7 @@ statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic"
47 #==================== 47 #====================
48 chatter, i, h, 2,0,4, "Chattiness of output" 48 chatter, i, h, 2,0,4, "Chattiness of output"
49 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 49 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
50 -debug, b, h, no,,, "Debugging mode activated" 50 +debug, b, h, no,,, "Activate debugging mode?"
51 mode, s, h, ql,,, "Mode of automatic parameters" 51 mode, s, h, ql,,, "Mode of automatic parameters"
52 logfile, f, h, cssens.log,,, "Log filename" 52 logfile, f, h, cssens.log,,, "Log filename"
53 53
cscripts/csspec.par
  View file @c65f2ac
@@ -32,10 +32,10 @@ outfile, f, a, spectrum.fits,,, "Output spectrum file" @@ -32,10 +32,10 @@ outfile, f, a, spectrum.fits,,, "Output spectrum file"
32 # Script parameters 32 # Script parameters
33 #================== 33 #==================
34 method, s, a, AUTO,SLICE|NODES|AUTO,, "Spectrum generation method" 34 method, s, a, AUTO,SLICE|NODES|AUTO,, "Spectrum generation method"
35 -emin, r, a, 0.1,,, "Lower energy limit (TeV)"  
36 -emax, r, a, 100.0,,, "Upper energy limit (TeV)"  
37 -enumbins, i, a, 20,,, "Number of energy bins"  
38 -ebinalg, s, a, LOG,LIN|LOG|FILE,, "Binning algorithm" 35 +ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
  36 +emin, r, a, 0.1,,, "Start value for first energy bin in TeV"
  37 +emax, r, a, 100.0,,, "Stop value for last energy bin in TeV"
  38 +enumbins, i, a, 20,1,200, "Number of energy bins"
39 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition" 39 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
40 statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic" 40 statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic"
41 calc_ts, b, h, yes,,, "Compute TS value in each bin" 41 calc_ts, b, h, yes,,, "Compute TS value in each bin"
@@ -49,6 +49,6 @@ fix_bkg, b, h, no,,, "Fix background parameters" @@ -49,6 +49,6 @@ fix_bkg, b, h, no,,, "Fix background parameters"
49 publish, b, h, no,,, "Publish spectrum on VO Hub?" 49 publish, b, h, no,,, "Publish spectrum on VO Hub?"
50 chatter, i, h, 2,0,4, "Chattiness of output" 50 chatter, i, h, 2,0,4, "Chattiness of output"
51 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 51 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
52 -debug, b, h, no,,, "Debugging mode activated" 52 +debug, b, h, no,,, "Activate debugging mode?"
53 mode, s, h, ql,,, "Mode of automatic parameters" 53 mode, s, h, ql,,, "Mode of automatic parameters"
54 logfile, f, h, csspec.log,,, "Log filename" 54 logfile, f, h, csspec.log,,, "Log filename"
cscripts/cssrcdetect.par
  View file @c65f2ac
@@ -36,6 +36,6 @@ fit_shape, b, h, yes,,, "Fit source shapes?" @@ -36,6 +36,6 @@ fit_shape, b, h, yes,,, "Fit source shapes?"
36 #==================== 36 #====================
37 chatter, i, h, 2,0,4, "Chattiness of output" 37 chatter, i, h, 2,0,4, "Chattiness of output"
38 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 38 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
39 -debug, b, h, no,,, "Debugging mode activated" 39 +debug, b, h, no,,, "Activate debugging mode?"
40 mode, s, h, ql,,, "Mode of automatic parameters" 40 mode, s, h, ql,,, "Mode of automatic parameters"
41 logfile, f, h, cssrcdetect.log,,, "Log filename" 41 logfile, f, h, cssrcdetect.log,,, "Log filename"
cscripts/cstsdist.par
  View file @c65f2ac
@@ -40,6 +40,6 @@ statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic" @@ -40,6 +40,6 @@ statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic"
40 #==================== 40 #====================
41 chatter, i, h, 2,0,4, "Chattiness of output" 41 chatter, i, h, 2,0,4, "Chattiness of output"
42 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 42 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
43 -debug, b, h, no,,, "Debugging mode activated" 43 +debug, b, h, no,,, "Activate debugging mode?"
44 mode, s, h, ql,,, "Mode of automatic parameters" 44 mode, s, h, ql,,, "Mode of automatic parameters"
45 logfile, f, h, cstsdist.log,,, "Log filename" 45 logfile, f, h, cstsdist.log,,, "Log filename"
cscripts/cstsmapmerge.par
  View file @c65f2ac
@@ -30,7 +30,7 @@ delete, b, h, no,,, "Delete merged files?" @@ -30,7 +30,7 @@ delete, b, h, no,,, "Delete merged files?"
30 #==================== 30 #====================
31 chatter, i, h, 2,0,4, "Chattiness of output" 31 chatter, i, h, 2,0,4, "Chattiness of output"
32 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 32 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
33 -debug, b, h, no,,, "Debugging mode activated" 33 +debug, b, h, no,,, "Activate debugging mode?"
34 mode, s, h, ql,,, "Mode of automatic parameters" 34 mode, s, h, ql,,, "Mode of automatic parameters"
35 logfile, f, h, cstsmapmerge.log,,, "Log filename" 35 logfile, f, h, cstsmapmerge.log,,, "Log filename"
36 36
cscripts/cstsmapsplit.par
  View file @c65f2ac
@@ -52,6 +52,6 @@ yref, r, a, 22.01,-90,90, "Second coordinate of image center in degrees (DE @@ -52,6 +52,6 @@ yref, r, a, 22.01,-90,90, "Second coordinate of image center in degrees (DE
52 publish, b, h, no,,, "Publish Test Statistic map on VO Hub?" 52 publish, b, h, no,,, "Publish Test Statistic map on VO Hub?"
53 chatter, i, h, 2,0,4, "Chattiness of output" 53 chatter, i, h, 2,0,4, "Chattiness of output"
54 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 54 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
55 -debug, b, h, no,,, "Debugging mode activated" 55 +debug, b, h, no,,, "Activate debugging mode?"
56 mode, s, h, ql,,, "Mode of automatic parameters" 56 mode, s, h, ql,,, "Mode of automatic parameters"
57 logfile, f, h, cstsmapsplit.log,,, "Log filename" 57 logfile, f, h, cstsmapsplit.log,,, "Log filename"
cscripts/csviscube.par
  View file @c65f2ac
@@ -37,6 +37,6 @@ zmax, r, h, 60.0,,, "Maximum zenith angle (deg)" @@ -37,6 +37,6 @@ zmax, r, h, 60.0,,, "Maximum zenith angle (deg)"
37 publish, b, h, no,,, "Publish visibility cube on VO Hub?" 37 publish, b, h, no,,, "Publish visibility cube on VO Hub?"
38 chatter, i, h, 2,0,4, "Chattiness of output" 38 chatter, i, h, 2,0,4, "Chattiness of output"
39 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 39 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
40 -debug, b, h, no,,, "Debugging mode activated" 40 +debug, b, h, no,,, "Activate debugging mode?"
41 mode, s, h, ql,,, "Mode of automatic parameters" 41 mode, s, h, ql,,, "Mode of automatic parameters"
42 logfile, f, h, csviscube.log,,, "Log filename" 42 logfile, f, h, csviscube.log,,, "Log filename"
cscripts/csworkflow.par
  View file @c65f2ac
@@ -23,6 +23,6 @@ inflow, f, a, workflow.xml,,, "Input workflow XML file" @@ -23,6 +23,6 @@ inflow, f, a, workflow.xml,,, "Input workflow XML file"
23 #==================== 23 #====================
24 chatter, i, h, 2,0,4, "Chattiness of output" 24 chatter, i, h, 2,0,4, "Chattiness of output"
25 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 25 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
26 -debug, b, h, no,,, "Debugging mode activated" 26 +debug, b, h, no,,, "Activate debugging mode?"
27 mode, s, h, ql,,, "Mode of automatic parameters" 27 mode, s, h, ql,,, "Mode of automatic parameters"
28 logfile, f, h, csworkflow.log,,, "Log filename" 28 logfile, f, h, csworkflow.log,,, "Log filename"
doc/source/users/reference_manual/csmodelsois.rst
  View file @c65f2ac
@@ -47,7 +47,10 @@ General parameters @@ -47,7 +47,10 @@ General parameters
47 Output model XML file (not generated if set to ``NONE``). 47 Output model XML file (not generated if set to ``NONE``).
48 48
49 ``ebinalg <FILE|LIN|LOG> [string]`` 49 ``ebinalg <FILE|LIN|LOG> [string]``
50 - Algorithm for defining energy bins. 50 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  51 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  52 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  53 + logarithmically between ``emin`` and ``emax``, respectively.
51 54
52 ``emin [real]`` 55 ``emin [real]``
53 Lower energy value for first energy bin (in TeV). 56 Lower energy value for first energy bin (in TeV).
@@ -59,7 +62,8 @@ General parameters @@ -59,7 +62,8 @@ General parameters
59 Number of energy bins. 62 Number of energy bins.
60 63
61 ``ebinfile [file]`` 64 ``ebinfile [file]``
62 - Name of the file containing the energy bin definition. 65 + Name of the file containing the energy bin definition. You may use :ref:`csebins`
  66 + to generate a file with appropriate energy bins.
63 67
64 ``nxpix [integer]`` 68 ``nxpix [integer]``
65 Number of map cube bins in Right Ascension or Galactic longitude. 69 Number of map cube bins in Right Ascension or Galactic longitude.
doc/source/users/reference_manual/csphagen.rst
  View file @c65f2ac
@@ -48,24 +48,28 @@ General parameters @@ -48,24 +48,28 @@ General parameters
48 ``(prefix = onoff) [string]`` 48 ``(prefix = onoff) [string]``
49 Prefix of the file name for output PHA, ARF, RMF, XML, and DS9 region files. 49 Prefix of the file name for output PHA, ARF, RMF, XML, and DS9 region files.
50 50
  51 +``ebinalg <FILE|LIN|LOG> [string]``
  52 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  53 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  54 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  55 + logarithmically between ``emin`` and ``emax``, respectively.
  56 +
51 ``emin [real]`` 57 ``emin [real]``
52 - Lower energy limit (TeV) if ``LIN`` or ``LOG`` binning algorithms are used. 58 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  59 + energy binning algorithms are used.
53 60
54 ``emax [real]`` 61 ``emax [real]``
55 - Upper energy limit (TeV) if ``LIN`` or ``LOG`` binning algorithms are used. 62 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  63 + energy binning algorithms are used.
56 64
57 ``enumbins [integer]`` 65 ``enumbins [integer]``
58 - Number of energy bins. At least 30 bins per decade are recommended for  
59 - proper evaluation of the instrument response.  
60 -  
61 -``ebinalg <FILE|LIN|LOG> [string]``  
62 - Algorithm for defining energy bins (``FILE``: energy bounds retrieved from  
63 - file, see ``ebinfile`` parameter; ``LIN``: linearly spaced energy bins;  
64 - ``LOG``: logarithmically spaced energy bins). 66 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are used.
  67 + At least 30 bins per decade are recommended for proper evaluation of the
  68 + instrument response.
65 69
66 ``ebinfile [file]`` 70 ``ebinfile [file]``
67 - Name of the file containing the energy bin definition if ``FILE`` algorithm  
68 - is used. 71 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  72 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
69 73
70 ``(srcshape = CIRCLE) <CIRCLE> [string]`` 74 ``(srcshape = CIRCLE) <CIRCLE> [string]``
71 Shape of the source region (``CIRCLE``: circular region around given position). 75 Shape of the source region (``CIRCLE``: circular region around given position).
doc/source/users/reference_manual/csresmap.rst
  View file @c65f2ac
@@ -63,19 +63,20 @@ General parameters @@ -63,19 +63,20 @@ General parameters
63 Output residual counts map file. 63 Output residual counts map file.
64 64
65 ``(ebinalg = LOG) <FILE|LIN|LOG> [string]`` 65 ``(ebinalg = LOG) <FILE|LIN|LOG> [string]``
66 - Algorithm for defining energy bins. 66 + Algorithm for defining energy bins for internal residual map computation.
67 67
68 ``emin [real]`` 68 ``emin [real]``
69 - Lower energy value for first energy bin (in TeV). 69 + Lower energy value for residual map (in TeV).
70 70
71 ``emax [real]`` 71 ``emax [real]``
72 - Upper energy value for last energy bin (in TeV). 72 + Upper energy value for residual map (in TeV).
73 73
74 ``(enumbins = 20) [integer]`` 74 ``(enumbins = 20) [integer]``
75 - Number of model cube energy bins. 75 + Number of model cube energy bins for internal residual map computation.
76 76
77 ``ebinfile [file]`` 77 ``ebinfile [file]``
78 - Name of the file containing the energy bin definition. 78 + Name of the file containing the energy bin definition for internal residual
  79 + map computation.
79 80
80 ``coordsys <CEL|GAL> [string]`` 81 ``coordsys <CEL|GAL> [string]``
81 Coordinate system (CEL - celestial, GAL - galactic). 82 Coordinate system (CEL - celestial, GAL - galactic).
doc/source/users/reference_manual/csresspec.rst
  View file @c65f2ac
@@ -88,19 +88,26 @@ General parameters @@ -88,19 +88,26 @@ General parameters
88 Calculate model for individual components? 88 Calculate model for individual components?
89 89
90 ``ebinalg <FILE|LIN|LOG> [string]`` 90 ``ebinalg <FILE|LIN|LOG> [string]``
91 - Algorithm for defining energy bins. 91 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  92 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  93 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  94 + logarithmically between ``emin`` and ``emax``, respectively.
92 95
93 ``emin [real]`` 96 ``emin [real]``
94 - Lower energy value for first energy bin (in TeV). 97 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  98 + energy binning algorithms are used.
95 99
96 ``emax [real]`` 100 ``emax [real]``
97 - Upper energy value for last energy bin (in TeV). 101 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  102 + energy binning algorithms are used.
98 103
99 ``enumbins [integer]`` 104 ``enumbins [integer]``
100 - Number of energy bins. 105 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  106 + used.
101 107
102 ``ebinfile [file]`` 108 ``ebinfile [file]``
103 - Name of the file containing the energy bin definition. 109 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  110 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
104 111
105 ``stack [boolean]`` 112 ``stack [boolean]``
106 Stack multiple observations for residual calculation? 113 Stack multiple observations for residual calculation?
doc/source/users/reference_manual/cssens.rst
  View file @c65f2ac
@@ -83,7 +83,7 @@ General parameters @@ -83,7 +83,7 @@ General parameters
83 Number of energy bins for sensitivity computation. 83 Number of energy bins for sensitivity computation.
84 84
85 ``(enumbins = 0) [integer]`` 85 ``(enumbins = 0) [integer]``
86 - Number of energy bins (0=unbinned). 86 + Number of energy bins for binned analysis (``0`` = unbinned analysis).
87 87
88 ``(npix = 200) [integer]`` 88 ``(npix = 200) [integer]``
89 Number of pixels for binned analysis. 89 Number of pixels for binned analysis.
doc/source/users/reference_manual/csspec.rst
  View file @c65f2ac
@@ -98,20 +98,27 @@ General parameters @@ -98,20 +98,27 @@ General parameters
98 data. For CTA-only observations ``SLICE`` will be used, otherwise ``NODES`` 98 data. For CTA-only observations ``SLICE`` will be used, otherwise ``NODES``
99 will be used. 99 will be used.
100 100
  101 +``ebinalg <FILE|LIN|LOG> [string]``
  102 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  103 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  104 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  105 + logarithmically between ``emin`` and ``emax``, respectively.
  106 +
101 ``emin [real]`` 107 ``emin [real]``
102 - Lower energy limit of events (in TeV). 108 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  109 + energy binning algorithms are used.
103 110
104 ``emax [real]`` 111 ``emax [real]``
105 - Upper energy limit of events (in TeV). 112 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  113 + energy binning algorithms are used.
106 114
107 ``enumbins [integer]`` 115 ``enumbins [integer]``
108 - Number of energy bins.  
109 -  
110 -``ebinalg <FILE|LIN|LOG> [string]``  
111 - Algorithm for defining energy bins. 116 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  117 + used.
112 118
113 ``ebinfile [file]`` 119 ``ebinfile [file]``
114 - Name of the file containing the energy bin definition. 120 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  121 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
115 122
116 ``(statistic = DEFAULT) <DEFAULT|CSTAT|WSTAT|CHI2> [string]`` 123 ``(statistic = DEFAULT) <DEFAULT|CSTAT|WSTAT|CHI2> [string]``
117 Optimization statistic. ``DEFAULT`` uses the default statistic for all 124 Optimization statistic. ``DEFAULT`` uses the default statistic for all
doc/source/users/reference_manual/ctbin.rst
  View file @c65f2ac
@@ -18,7 +18,7 @@ specified in an observation definition file. In case that multiple event @@ -18,7 +18,7 @@ specified in an observation definition file. In case that multiple event
18 lists are given in an observation definition file, the tool will loop over 18 lists are given in an observation definition file, the tool will loop over
19 all event lists and fill all events into a single counts cube. 19 all event lists and fill all events into a single counts cube.
20 20
21 -ctbin generates a counts cube FITS file comprising three extensions. The 21 +:ref:`ctbin` generates a counts cube FITS file comprising three extensions. The
22 primary extension contains a 3-dimensional image that contains the counts 22 primary extension contains a 3-dimensional image that contains the counts
23 cube values. The next extension named ``EBOUNDS`` contains a binary table 23 cube values. The next extension named ``EBOUNDS`` contains a binary table
24 that defines the energy boundaries of the counts cube. The last extension 24 that defines the energy boundaries of the counts cube. The last extension
@@ -36,19 +36,26 @@ General parameters @@ -36,19 +36,26 @@ General parameters
36 Output counts cube file. 36 Output counts cube file.
37 37
38 ``ebinalg <FILE|LIN|LOG> [string]`` 38 ``ebinalg <FILE|LIN|LOG> [string]``
39 - Algorithm for defining energy bins. 39 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  40 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  41 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  42 + logarithmically between ``emin`` and ``emax``, respectively.
40 43
41 ``emin [real]`` 44 ``emin [real]``
42 - Lower energy value for first energy bin (in TeV). 45 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  46 + energy binning algorithms are used.
43 47
44 ``emax [real]`` 48 ``emax [real]``
45 - Upper energy value for last energy bin (in TeV). 49 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  50 + energy binning algorithms are used.
46 51
47 ``enumbins [integer]`` 52 ``enumbins [integer]``
48 - Number of energy bins. 53 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  54 + used.
49 55
50 ``ebinfile [file]`` 56 ``ebinfile [file]``
51 - Name of the file containing the energy bin definition. 57 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  58 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
52 59
53 ``(usepnt = no) [boolean]`` 60 ``(usepnt = no) [boolean]``
54 Use CTA pointing direction for cube centre instead of xref/yref parameters? 61 Use CTA pointing direction for cube centre instead of xref/yref parameters?
doc/source/users/reference_manual/ctbkgcube.rst
  View file @c65f2ac
@@ -72,19 +72,26 @@ General parameters @@ -72,19 +72,26 @@ General parameters
72 Output model XML file. 72 Output model XML file.
73 73
74 ``ebinalg <FILE|LIN|LOG> [string]`` 74 ``ebinalg <FILE|LIN|LOG> [string]``
75 - Algorithm for defining energy bins. 75 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  76 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  77 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  78 + logarithmically between ``emin`` and ``emax``, respectively.
76 79
77 ``emin [real]`` 80 ``emin [real]``
78 - Lower energy value for first energy bin (in TeV). 81 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  82 + energy binning algorithms are used.
79 83
80 ``emax [real]`` 84 ``emax [real]``
81 - Upper energy value for last energy bin (in TeV). 85 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  86 + energy binning algorithms are used.
82 87
83 ``enumbins [integer]`` 88 ``enumbins [integer]``
84 - Number of energy bins. 89 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  90 + used.
85 91
86 ``ebinfile [file]`` 92 ``ebinfile [file]``
87 - Name of the file containing the energy bin definition. 93 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  94 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
88 95
89 ``(addbounds = no) [boolean]`` 96 ``(addbounds = no) [boolean]``
90 Add energies to the background cube at the observation energy boundaries? 97 Add energies to the background cube at the observation energy boundaries?
doc/source/users/reference_manual/ctbutterfly.rst
  View file @c65f2ac
@@ -97,20 +97,27 @@ General parameters @@ -97,20 +97,27 @@ General parameters
97 ``(matrix = "NONE") [file]`` 97 ``(matrix = "NONE") [file]``
98 Input covariance matrix file (not used) 98 Input covariance matrix file (not used)
99 99
100 -``(ebinalg = "LOG") <FILE|LIN|LOG> [string]``  
101 - Butterfly energy binning algorithm. 100 +``(ebinalg = LOG) <FILE|LIN|LOG> [string]``
  101 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  102 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  103 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  104 + logarithmically between ``emin`` and ``emax``, respectively.
102 105
103 ``emin [real]`` 106 ``emin [real]``
104 - Minimum energy of butterfly (in TeV). 107 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  108 + energy binning algorithms are used.
105 109
106 ``emax [real]`` 110 ``emax [real]``
107 - Maximum energy of butterfly (in TeV). 111 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  112 + energy binning algorithms are used.
108 113
109 -``(enumbins = 100) [string]``  
110 - Number of energy bins of butterfly. 114 +``(enumbins = 100) [integer]``
  115 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  116 + used.
111 117
112 -``(ebinfile = "NONE") [string]``  
113 - File for energy binning algorithm. 118 +``ebinfile [file]``
  119 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  120 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
114 121
115 122
116 Standard parameters 123 Standard parameters
doc/source/users/reference_manual/ctedispcube.rst
  View file @c65f2ac
@@ -56,19 +56,26 @@ General parameters @@ -56,19 +56,26 @@ General parameters
56 Output energy dispersion cube file. 56 Output energy dispersion cube file.
57 57
58 ``ebinalg <FILE|LIN|LOG> [string]`` 58 ``ebinalg <FILE|LIN|LOG> [string]``
59 - Algorithm for defining energy bins. 59 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  60 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  61 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  62 + logarithmically between ``emin`` and ``emax``, respectively.
60 63
61 ``emin [real]`` 64 ``emin [real]``
62 - Lower energy value for first energy bin (in TeV). 65 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  66 + energy binning algorithms are used.
63 67
64 ``emax [real]`` 68 ``emax [real]``
65 - Upper energy value for last energy bin (in TeV). 69 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  70 + energy binning algorithms are used.
66 71
67 ``enumbins [integer]`` 72 ``enumbins [integer]``
68 - Number of energy bins. 73 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  74 + used.
69 75
70 ``ebinfile [file]`` 76 ``ebinfile [file]``
71 - Name of the file containing the energy bin definition. 77 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  78 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
72 79
73 ``(addbounds = no) [boolean]`` 80 ``(addbounds = no) [boolean]``
74 Add energies to the energy dispersion cube at the observation energy boundaries? 81 Add energies to the energy dispersion cube at the observation energy boundaries?
doc/source/users/reference_manual/ctexpcube.rst
  View file @c65f2ac
@@ -63,19 +63,26 @@ General parameters @@ -63,19 +63,26 @@ General parameters
63 Output exposure cube file. 63 Output exposure cube file.
64 64
65 ``ebinalg <FILE|LIN|LOG> [string]`` 65 ``ebinalg <FILE|LIN|LOG> [string]``
66 - Algorithm for defining energy bins. 66 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  67 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  68 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  69 + logarithmically between ``emin`` and ``emax``, respectively.
67 70
68 ``emin [real]`` 71 ``emin [real]``
69 - Lower energy value for first energy bin (in TeV). 72 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  73 + energy binning algorithms are used.
70 74
71 ``emax [real]`` 75 ``emax [real]``
72 - Upper energy value for last energy bin (in TeV). 76 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  77 + energy binning algorithms are used.
73 78
74 ``enumbins [integer]`` 79 ``enumbins [integer]``
75 - Number of energy bins. 80 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  81 + used.
76 82
77 ``ebinfile [file]`` 83 ``ebinfile [file]``
78 - Name of the file containing the energy bin definition. 84 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  85 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
79 86
80 ``(addbounds = no) [boolean]`` 87 ``(addbounds = no) [boolean]``
81 Add energies to the exposure cube at the observation energy boundaries? 88 Add energies to the exposure cube at the observation energy boundaries?
doc/source/users/reference_manual/ctmapcube.rst
  View file @c65f2ac
@@ -35,19 +35,26 @@ General parameters @@ -35,19 +35,26 @@ General parameters
35 Sigma of Gaussian to be used for point sources (in arcmin). 35 Sigma of Gaussian to be used for point sources (in arcmin).
36 36
37 ``ebinalg <FILE|LIN|LOG> [string]`` 37 ``ebinalg <FILE|LIN|LOG> [string]``
38 - Algorithm for defining energy bins. 38 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  39 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  40 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  41 + logarithmically between ``emin`` and ``emax``, respectively.
39 42
40 ``emin [real]`` 43 ``emin [real]``
41 - Lower energy value for first energy bin (in TeV). 44 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  45 + energy binning algorithms are used.
42 46
43 ``emax [real]`` 47 ``emax [real]``
44 - Upper energy value for last energy bin (in TeV). 48 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  49 + energy binning algorithms are used.
45 50
46 ``enumbins [integer]`` 51 ``enumbins [integer]``
47 - Number of energy bins. 52 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  53 + used.
48 54
49 ``ebinfile [file]`` 55 ``ebinfile [file]``
50 - Name of the file containing the energy bin definition. 56 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  57 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
51 58
52 ``nxpix [integer]`` 59 ``nxpix [integer]``
53 Number of cube bins in Right Ascension or Galactic longitude. 60 Number of cube bins in Right Ascension or Galactic longitude.
doc/source/users/reference_manual/ctmodel.rst
  View file @c65f2ac
@@ -98,20 +98,27 @@ General parameters @@ -98,20 +98,27 @@ General parameters
98 ``(deadc = 0.95) [real]`` 98 ``(deadc = 0.95) [real]``
99 Average deadtime correction factor. 99 Average deadtime correction factor.
100 100
101 -``(ebinalg = LOG) <FILE|LIN|LOG> [string]``  
102 - Algorithm for defining energy bins. 101 +``ebinalg <FILE|LIN|LOG> [string]``
  102 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  103 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  104 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  105 + logarithmically between ``emin`` and ``emax``, respectively.
103 106
104 ``emin [real]`` 107 ``emin [real]``
105 - Lower energy value for first energy bin (in TeV). 108 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  109 + energy binning algorithms are used.
106 110
107 ``emax [real]`` 111 ``emax [real]``
108 - Upper energy value for last energy bin (in TeV). 112 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  113 + energy binning algorithms are used.
109 114
110 ``enumbins [integer]`` 115 ``enumbins [integer]``
111 - Number of energy bins. 116 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  117 + used.
112 118
113 -``(ebinfile = NONE) [file]``  
114 - Name of the file containing the energy bin definition. 119 +``ebinfile [file]``
  120 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  121 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
115 122
116 ``(usepnt = no) [boolean]`` 123 ``(usepnt = no) [boolean]``
117 Use pointing instead of xref/yref parameters? 124 Use pointing instead of xref/yref parameters?
doc/source/users/reference_manual/ctpsfcube.rst
  View file @c65f2ac
@@ -55,19 +55,26 @@ General parameters @@ -55,19 +55,26 @@ General parameters
55 Output point spread function cube file. 55 Output point spread function cube file.
56 56
57 ``ebinalg <FILE|LIN|LOG> [string]`` 57 ``ebinalg <FILE|LIN|LOG> [string]``
58 - Algorithm for defining energy bins. 58 + Algorithm for defining energy bins. For ``FILE``, the energy bins are defined
  59 + in a FITS file that is specified by the ``ebinfile`` parameter, for ``LIN``
  60 + and ``LOG`` there will be ``enumbins`` energy bins spaced linearly or
  61 + logarithmically between ``emin`` and ``emax``, respectively.
59 62
60 ``emin [real]`` 63 ``emin [real]``
61 - Lower energy value for first energy bin (in TeV). 64 + Lower energy value for first energy bin (in TeV) if ``LIN`` or ``LOG``
  65 + energy binning algorithms are used.
62 66
63 ``emax [real]`` 67 ``emax [real]``
64 - Upper energy value for last energy bin (in TeV). 68 + Upper energy value for last energy bin (in TeV) if ``LIN`` or ``LOG``
  69 + energy binning algorithms are used.
65 70
66 ``enumbins [integer]`` 71 ``enumbins [integer]``
67 - Number of energy bins. 72 + Number of energy bins if ``LIN`` or ``LOG`` energy binning algorithms are
  73 + used.
68 74
69 ``ebinfile [file]`` 75 ``ebinfile [file]``
70 - Name of the file containing the energy bin definition. 76 + Name of the file containing the energy binning definition if ``ebinalg=FILE``.
  77 + You may use :ref:`csebins` to generate a file with appropriate energy binning.
71 78
72 ``(addbounds = no) [boolean]`` 79 ``(addbounds = no) [boolean]``
73 Add energies to the point spread function cube at the observation energy boundaries? 80 Add energies to the point spread function cube at the observation energy boundaries?
doc/source/users/reference_manual/ctselect.rst
  View file @c65f2ac
@@ -52,37 +52,37 @@ General parameters @@ -52,37 +52,37 @@ General parameters
52 52
53 ``ra [real]`` 53 ``ra [real]``
54 Right Ascension of acceptance cone (or ROI) centre (J2000, in degrees). 54 Right Ascension of acceptance cone (or ROI) centre (J2000, in degrees).
55 - If INDEF, NONE, UNDEF or UNDEFINED is passed as value, no ROI 55 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no ROI
56 selection will be performed. 56 selection will be performed.
57 57
58 ``dec [real]`` 58 ``dec [real]``
59 Declination of acceptance cone (or ROI) centre (J2000, in degrees). 59 Declination of acceptance cone (or ROI) centre (J2000, in degrees).
60 - If INDEF, NONE, UNDEF or UNDEFINED is passed as value, no ROI 60 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no ROI
61 selection will be performed. 61 selection will be performed.
62 62
63 ``rad [real]`` 63 ``rad [real]``
64 Radius of acceptance cone (or ROI) centre (in degrees). 64 Radius of acceptance cone (or ROI) centre (in degrees).
65 - If INDEF, NONE, UNDEF or UNDEFINED is passed as value, no ROI 65 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no ROI
66 selection will be performed. 66 selection will be performed.
67 67
68 ``tmin [time]`` 68 ``tmin [time]``
69 Start time (UTC string, JD, MJD or time in seconds). 69 Start time (UTC string, JD, MJD or time in seconds).
70 - If INDEF, NONE, UNDEF or UNDEFINED is passed as value, no time 70 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no time
71 selection will be performed. 71 selection will be performed.
72 72
73 ``tmax [time]`` 73 ``tmax [time]``
74 Stop time (UTC string, JD, MJD or time in seconds). 74 Stop time (UTC string, JD, MJD or time in seconds).
75 - If INDEF, NONE, UNDEF or UNDEFINED is passed as value, no time 75 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no time
76 selection will be performed. 76 selection will be performed.
77 77
78 ``emin [real]`` 78 ``emin [real]``
79 Lower energy limit of events (in TeV). 79 Lower energy limit of events (in TeV).
80 - If INDEF, NONE, UNDEF or UNDEFINED is passed as value, no energy 80 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no energy
81 selection will be performed. 81 selection will be performed.
82 82
83 ``emax [real]`` 83 ``emax [real]``
84 Upper energy limit of events (in TeV). 84 Upper energy limit of events (in TeV).
85 - If INDEF, NONE, UNDEF or UNDEFINED is passed as value, no energy 85 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no energy
86 selection will be performed. 86 selection will be performed.
87 87
88 ``(phase = NONE) [string]`` 88 ``(phase = NONE) [string]``
doc/source/users/reference_manual/cttsmap.rst
  View file @c65f2ac
@@ -104,7 +104,7 @@ General parameters @@ -104,7 +104,7 @@ General parameters
104 ``(binmax = -1) [integer]`` 104 ``(binmax = -1) [integer]``
105 Last bin to compute. 105 Last bin to compute.
106 106
107 -``(logLO = -1) [real]`` 107 +``(logL0 = -1) [real]``
108 LogLikelihood value of null hypothesis. 108 LogLikelihood value of null hypothesis.
109 109
110 110
src/ctbin/ctbin.par
  View file @c65f2ac
@@ -23,8 +23,8 @@ outcube, f, a, cntcube.fits,,, &quot;Output counts cube file&quot; @@ -23,8 +23,8 @@ outcube, f, a, cntcube.fits,,, &quot;Output counts cube file&quot;
23 # Energy binning parameters 23 # Energy binning parameters
24 #========================== 24 #==========================
25 ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins" 25 ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
26 -emin, r, a, 0.1,,, "Start value for first energy bin in TeV"  
27 -emax, r, a, 100.0,,, "Stop value for last energy bin in TeV" 26 +emin, r, a, 0.1,,, "Lower energy limit (TeV)"
  27 +emax, r, a, 100.0,,, "Upper energy limit (TeV)"
28 enumbins, i, a, 20,1,200, "Number of energy bins" 28 enumbins, i, a, 20,1,200, "Number of energy bins"
29 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition" 29 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
30 30
@@ -46,6 +46,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC @@ -46,6 +46,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC
46 publish, b, h, no,,, "Publish counts cube on VO Hub?" 46 publish, b, h, no,,, "Publish counts cube on VO Hub?"
47 chatter, i, h, 2,0,4, "Chattiness of output" 47 chatter, i, h, 2,0,4, "Chattiness of output"
48 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 48 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
49 -debug, b, h, no,,, "Debugging mode activated" 49 +debug, b, h, no,,, "Activate debugging mode?"
50 mode, s, h, ql,,, "Mode of automatic parameters" 50 mode, s, h, ql,,, "Mode of automatic parameters"
51 logfile, f, h, ctbin.log,,, "Log filename" 51 logfile, f, h, ctbin.log,,, "Log filename"
src/ctbkgcube/ctbkgcube.par
  View file @c65f2ac
@@ -16,22 +16,22 @@ @@ -16,22 +16,22 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "NONE",,, "Input event list or observation definition XML file"  
20 -inmodel, f, a, "NONE",,, "Input model definition XML file"  
21 -incube, f, a, "NONE",,, "Input counts cube file to extract background cube definition"  
22 -caldb, s, a, "prod2",,, "Calibration database"  
23 -irf, s, a, "South_0.5h",,, "Instrument response function"  
24 -outcube, f, a, "bkgcube.fits",,, "Output background cube file"  
25 -outmodel, f, a, "NONE",,, "Output model definition XML file" 19 +inobs, f, a, NONE,,, "Input event list or observation definition XML file"
  20 +inmodel, f, a, NONE,,, "Input model definition XML file"
  21 +incube, f, a, NONE,,, "Input counts cube file to extract background cube definition"
  22 +caldb, s, a, prod2,,, "Calibration database"
  23 +irf, s, a, South_0.5h,,, "Instrument response function"
  24 +outcube, f, a, bkgcube.fits,,, "Output background cube file"
  25 +outmodel, f, a, NONE,,, "Output model definition XML file"
26 26
27 # 27 #
28 # Energy binning parameters 28 # Energy binning parameters
29 #========================== 29 #==========================
30 -ebinalg, s, h, "LOG",FILE|LIN|LOG,, "Algorithm for defining energy bins" 30 +ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
31 emin, r, a, 0.1,,, "Lower energy limit (TeV)" 31 emin, r, a, 0.1,,, "Lower energy limit (TeV)"
32 emax, r, a, 100.0,,, "Upper energy limit (TeV)" 32 emax, r, a, 100.0,,, "Upper energy limit (TeV)"
33 -enumbins, i, a, 20,,, "Number of energy bins"  
34 -ebinfile, f, h, "NONE",,, "Name of the file containing the energy bin definition" 33 +enumbins, i, a, 20,1,200, "Number of energy bins"
  34 +ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
35 addbounds, b, h, no,,, "Add energies at observation energy boundaries?" 35 addbounds, b, h, no,,, "Add energies at observation energy boundaries?"
36 36
37 # 37 #
@@ -52,6 +52,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC @@ -52,6 +52,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC
52 publish, b, h, no,,, "Publish sky map on VO Hub?" 52 publish, b, h, no,,, "Publish sky map on VO Hub?"
53 chatter, i, h, 2,0,4, "Chattiness of output" 53 chatter, i, h, 2,0,4, "Chattiness of output"
54 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 54 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
55 -debug, b, h, no,,, "Debugging mode activated"  
56 -mode, s, h, "ql",,, "Mode of automatic parameters"  
57 -logfile, f, h, "ctbkgcube.log",,, "Log filename" 55 +debug, b, h, no,,, "Activate debugging mode?"
  56 +mode, s, h, ql,,, "Mode of automatic parameters"
  57 +logfile, f, h, ctbkgcube.log,,, "Log filename"
src/ctbutterfly/ctbutterfly.par
  View file @c65f2ac
@@ -16,17 +16,17 @@ @@ -16,17 +16,17 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "events.fits",,,"Input event list, counts cube or observation definition XML file"  
20 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Input model definition XML file"  
21 -srcname, s, a, "Crab",,,"Source of interest"  
22 -expcube, f, a, "NONE",,, "Input exposure cube file"  
23 -psfcube, f, a, "NONE",,, "Input PSF cube file"  
24 -edispcube, f, a, "NONE",,, "Input energy dispersion cube file"  
25 -bkgcube, f, a, "NONE",,, "Input background cube file"  
26 -caldb, s, a, "prod2",,, "Calibration database"  
27 -irf, s, a, "South_0.5h",,, "Instrument response function" 19 +inobs, f, a, events.fits,,,"Input event list, counts cube or observation definition XML file"
  20 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file"
  21 +srcname, s, a, Crab,,,"Source of interest"
  22 +expcube, f, a, NONE,,, "Input exposure cube file"
  23 +psfcube, f, a, NONE,,, "Input PSF cube file"
  24 +edispcube, f, a, NONE,,, "Input energy dispersion cube file"
  25 +bkgcube, f, a, NONE,,, "Input background cube file"
  26 +caldb, s, a, prod2,,, "Calibration database"
  27 +irf, s, a, South_0.5h,,, "Instrument response function"
28 edisp, b, h, no,,, "Apply energy dispersion?" 28 edisp, b, h, no,,, "Apply energy dispersion?"
29 -outfile, f, a, "butterfly.txt",,, "Output ASCII file" 29 +outfile, f, a, butterfly.txt,,, "Output ASCII file"
30 method, s, h, GAUSSIAN, GAUSSIAN|ENVELOPE,,"Butterfly computation method" 30 method, s, h, GAUSSIAN, GAUSSIAN|ENVELOPE,,"Butterfly computation method"
31 31
32 # 32 #
@@ -35,22 +35,22 @@ method, s, h, GAUSSIAN, GAUSSIAN|ENVELOPE,,&quot;Butterfly computation method&quot; @@ -35,22 +35,22 @@ method, s, h, GAUSSIAN, GAUSSIAN|ENVELOPE,,&quot;Butterfly computation method&quot;
35 fit, b, h, no,,, "Perform maximum likelihood fitting?" 35 fit, b, h, no,,, "Perform maximum likelihood fitting?"
36 confidence, r, h, 0.68,0.0,1.0, "Confidence level" 36 confidence, r, h, 0.68,0.0,1.0, "Confidence level"
37 statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic" 37 statistic, s, h, DEFAULT,DEFAULT|CSTAT|WSTAT|CHI2,, "Optimization statistic"
38 -matrix, f, h, "NONE",,, "Input covariance Matrix FITS file" 38 +matrix, f, h, NONE,,, "Input covariance Matrix FITS file"
39 39
40 # 40 #
41 # Energy binning parameters 41 # Energy binning parameters
42 #========================== 42 #==========================
43 -ebinalg, s, h, "LOG", FILE|LIN|LOG,,"Algorithm for defining energy bins"  
44 -emin, r, a, 0.1,,,"Lower energy limit (TeV)"  
45 -emax, r, a, 100.0,,,"Upper energy limit (TeV)"  
46 -enumbins, i, h, 100,,,"Number of energy bins"  
47 -ebinfile, f, h, "NONE",,,"Name of the file containing the energy bin definition" 43 +ebinalg, s, h, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
  44 +emin, r, a, 0.1,,, "Lower energy limit (TeV)"
  45 +emax, r, a, 100.0,,, "Upper energy limit (TeV)"
  46 +enumbins, i, h, 100,1,1000, "Number of energy bins"
  47 +ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
48 48
49 # 49 #
50 # Standard parameters 50 # Standard parameters
51 #==================== 51 #====================
52 chatter, i, h, 2,0,4, "Chattiness of output" 52 chatter, i, h, 2,0,4, "Chattiness of output"
53 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 53 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
54 -debug, b, h, no,,, "Debugging mode activated"  
55 -mode, s, h, "ql",,, "Mode of automatic parameters"  
56 -logfile, f, h, "ctbutterfly.log",,, "Log filename" 54 +debug, b, h, no,,, "Activate debugging mode?"
  55 +mode, s, h, ql,,, "Mode of automatic parameters"
  56 +logfile, f, h, ctbutterfly.log,,, "Log filename"
src/ctcubemask/ctcubemask.par
  View file @c65f2ac
@@ -16,9 +16,9 @@ @@ -16,9 +16,9 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "cntcube.fits",,, "Input counts cube or observation definition XML file"  
20 -outcube, f, a, "cntcube_filtered.fits",,, "Output counts cube or observation definition XML file"  
21 -prefix, s, h, "filtered_",,, "Prefix for counts cube in observation definition XML file" 19 +inobs, f, a, cntcube.fits,,, "Input counts cube or observation definition XML file"
  20 +outcube, f, a, cntcube_filtered.fits,,, "Output counts cube or observation definition XML file"
  21 +prefix, s, h, filtered_,,, "Prefix for counts cube in observation definition XML file"
22 22
23 # 23 #
24 # Selection parameters 24 # Selection parameters
@@ -27,7 +27,7 @@ usepnt, b, h, no,,, &quot;Use pointing instead of RA/DEC parameters?&quot; @@ -27,7 +27,7 @@ usepnt, b, h, no,,, &quot;Use pointing instead of RA/DEC parameters?&quot;
27 ra, r, a, 83.63,0,360, "RA for ROI centre (degrees)" 27 ra, r, a, 83.63,0,360, "RA for ROI centre (degrees)"
28 dec, r, a, 22.01,-90,90, "Dec for ROI centre (degrees)" 28 dec, r, a, 22.01,-90,90, "Dec for ROI centre (degrees)"
29 rad, r, a, 3.0,0,180, "Radius of ROI (degrees)" 29 rad, r, a, 3.0,0,180, "Radius of ROI (degrees)"
30 -regfile, f, a, "NONE",,, "Input exclusion region file in ds9 format" 30 +regfile, f, a, NONE,,, "Input exclusion region file in ds9 format"
31 emin, r, a, 0.1,,, "Lower energy limit (TeV)" 31 emin, r, a, 0.1,,, "Lower energy limit (TeV)"
32 emax, r, a, 100.0,,, "Upper energy limit (TeV)" 32 emax, r, a, 100.0,,, "Upper energy limit (TeV)"
33 33
@@ -37,6 +37,6 @@ emax, r, a, 100.0,,, &quot;Upper energy limit (TeV)&quot; @@ -37,6 +37,6 @@ emax, r, a, 100.0,,, &quot;Upper energy limit (TeV)&quot;
37 publish, b, h, no,,, "Publish counts cube on VO Hub?" 37 publish, b, h, no,,, "Publish counts cube on VO Hub?"
38 chatter, i, h, 2,0,4, "Chattiness of output" 38 chatter, i, h, 2,0,4, "Chattiness of output"
39 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 39 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
40 -debug, b, h, no,,, "Debugging mode activated"  
41 -mode, s, h, "ql",,, "Mode of automatic parameters"  
42 -logfile, f, h, "ctcubemask.par.log",,, "Log filename" 40 +debug, b, h, no,,, "Activate debugging mode?"
  41 +mode, s, h, ql,,, "Mode of automatic parameters"
  42 +logfile, f, h, ctcubemask.log,,, "Log filename"
src/ctedispcube/ctedispcube.par
  View file @c65f2ac
@@ -16,20 +16,20 @@ @@ -16,20 +16,20 @@
16 # 16 #
17 # Observational parameters 17 # Observational parameters
18 #=================== 18 #===================
19 -inobs, f, a, "NONE",,, "Input event list or observation definition XML file"  
20 -incube, f, a, "NONE",,, "Input counts cube file to extract energy dispersion cube definition"  
21 -caldb, s, a, "prod2",,, "Calibration database"  
22 -irf, s, a, "South_0.5h",,, "Instrument response function"  
23 -outcube, f, a, "edispcube.fits",,, "Output energy dispersion cube file" 19 +inobs, f, a, NONE,,, "Input event list or observation definition XML file"
  20 +incube, f, a, NONE,,, "Input counts cube file to extract energy dispersion cube definition"
  21 +caldb, s, a, prod2,,, "Calibration database"
  22 +irf, s, a, South_0.5h,,, "Instrument response function"
  23 +outcube, f, a, edispcube.fits,,, "Output energy dispersion cube file"
24 24
25 # 25 #
26 # Energy binning parameters 26 # Energy binning parameters
27 #========================== 27 #==========================
28 -ebinalg, s, h, "LOG", FILE|LIN|LOG,, "Algorithm for defining energy bins" 28 +ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
29 emin, r, a, 0.1,,, "Lower energy limit (TeV)" 29 emin, r, a, 0.1,,, "Lower energy limit (TeV)"
30 emax, r, a, 100.0,,, "Upper energy limit (TeV)" 30 emax, r, a, 100.0,,, "Upper energy limit (TeV)"
31 -enumbins, i, a, 20,,, "Number of energy bins"  
32 -ebinfile, f, h, "NONE",,, "Name of the file containing the energy bin definition" 31 +enumbins, i, a, 20,1,200, "Number of energy bins"
  32 +ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
33 addbounds, b, h, no,,, "Add energies at observation energy boundaries?" 33 addbounds, b, h, no,,, "Add energies at observation energy boundaries?"
34 34
35 # 35 #
@@ -55,6 +55,6 @@ migrabins, i, h, 100,,, &quot;Number of migration bins&quot; @@ -55,6 +55,6 @@ migrabins, i, h, 100,,, &quot;Number of migration bins&quot;
55 #==================== 55 #====================
56 chatter, i, h, 2,0,4, "Chattiness of output" 56 chatter, i, h, 2,0,4, "Chattiness of output"
57 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 57 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
58 -debug, b, h, no,,, "Debugging mode activated"  
59 -mode, s, h, "ql",,, "Mode of automatic parameters"  
60 -logfile, f, h, "ctedispcube.log",,, "Log filename" 58 +debug, b, h, no,,, "Activate debugging mode?"
  59 +mode, s, h, ql,,, "Mode of automatic parameters"
  60 +logfile, f, h, ctedispcube.log,,, "Log filename"
src/cterror/cterror.par
  View file @c65f2ac
@@ -17,17 +17,17 @@ @@ -17,17 +17,17 @@
17 # 17 #
18 # General parameters 18 # General parameters
19 #=================== 19 #===================
20 -inobs, f, a, "events.fits",,, "Input event list, counts cube or observation definition XML file"  
21 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Input model definiton XML file"  
22 -srcname, s, a, "Crab",,, "Source of interest"  
23 -expcube, f, a, "NONE",,, "Input exposure cube file"  
24 -psfcube, f, a, "NONE",,, "Input PSF cube file"  
25 -edispcube,f, a, "NONE",,, "Input energy dispersion cube file"  
26 -bkgcube, f, a, "NONE",,, "Input background cube file"  
27 -caldb, s, a, "prod2",,, "Calibration database"  
28 -irf, s, a, "South_0.5h",,, "Instrument response function" 20 +inobs, f, a, events.fits,,, "Input event list, counts cube or observation definition XML file"
  21 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definiton XML file"
  22 +srcname, s, a, Crab,,, "Source of interest"
  23 +expcube, f, a, NONE,,, "Input exposure cube file"
  24 +psfcube, f, a, NONE,,, "Input PSF cube file"
  25 +edispcube,f, a, NONE,,, "Input energy dispersion cube file"
  26 +bkgcube, f, a, NONE,,, "Input background cube file"
  27 +caldb, s, a, prod2,,, "Calibration database"
  28 +irf, s, a, South_0.5h,,, "Instrument response function"
29 edisp, b, h, no,,, "Apply energy dispersion?" 29 edisp, b, h, no,,, "Apply energy dispersion?"
30 -outmodel, f, a, "results.xml",,, "Output model definiton XML file" 30 +outmodel, f, a, results.xml,,, "Output model definiton XML file"
31 31
32 # 32 #
33 # Error calculation parameters 33 # Error calculation parameters
@@ -42,6 +42,6 @@ max_iter, i, h, 50,1,1000, &quot;Maximum number of iterations&quot; @@ -42,6 +42,6 @@ max_iter, i, h, 50,1,1000, &quot;Maximum number of iterations&quot;
42 #==================== 42 #====================
43 chatter, i, h, 2,0,4, "Chattiness of output" 43 chatter, i, h, 2,0,4, "Chattiness of output"
44 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 44 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
45 -debug, b, h, no,,, "Debugging mode activated"  
46 -mode, s, h, "ql",,, "Mode of automatic parameters"  
47 -logfile, f, h, "cterror.log",,, "Log filename" 45 +debug, b, h, no,,, "Activate debugging mode?"
  46 +mode, s, h, ql,,, "Mode of automatic parameters"
  47 +logfile, f, h, cterror.log,,, "Log filename"
src/ctexpcube/ctexpcube.par
  View file @c65f2ac
@@ -16,20 +16,20 @@ @@ -16,20 +16,20 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "NONE",,, "Input event list or observation definition XML file"  
20 -incube, f, a, "NONE",,, "Input counts cube file to extract exposure cube definition"  
21 -caldb, s, a, "prod2",,, "Calibration database"  
22 -irf, s, a, "South_0.5h",,, "Instrument response function"  
23 -outcube, f, a, "expcube.fits",,, "Output exposure cube file" 19 +inobs, f, a, NONE,,, "Input event list or observation definition XML file"
  20 +incube, f, a, NONE,,, "Input counts cube file to extract exposure cube definition"
  21 +caldb, s, a, prod2,,, "Calibration database"
  22 +irf, s, a, South_0.5h,,, "Instrument response function"
  23 +outcube, f, a, expcube.fits,,, "Output exposure cube file"
24 24
25 # 25 #
26 # Energy binning parameters 26 # Energy binning parameters
27 #========================== 27 #==========================
28 -ebinalg, s, h, "LOG", FILE|LIN|LOG,,"Algorithm for defining energy bins"  
29 -emin, r, a, 0.1,,,"Lower energy limit (TeV)" 28 +ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
  29 +emin, r, a, 0.1,,, "Lower energy limit (TeV)"
30 emax, r, a, 100.0,,, "Upper energy limit (TeV)" 30 emax, r, a, 100.0,,, "Upper energy limit (TeV)"
31 -enumbins, i, a, 20,,, "Number of energy bins"  
32 -ebinfile, f, h, "NONE",,, "Name of the file containing the energy bin definition" 31 +enumbins, i, a, 20,1,200, "Number of energy bins"
  32 +ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
33 addbounds, b, h, no,,, "Add energies at observation energy boundaries?" 33 addbounds, b, h, no,,, "Add energies at observation energy boundaries?"
34 34
35 # 35 #
@@ -50,6 +50,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC @@ -50,6 +50,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC
50 publish, b, h, no,,, "Publish sky map on VO Hub?" 50 publish, b, h, no,,, "Publish sky map on VO Hub?"
51 chatter, i, h, 2,0,4, "Chattiness of output" 51 chatter, i, h, 2,0,4, "Chattiness of output"
52 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 52 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
53 -debug, b, h, no,,, "Debugging mode activated"  
54 -mode, s, h, "ql",,, "Mode of automatic parameters"  
55 -logfile, f, h, "ctexpcube.log",,, "Log filename" 53 +debug, b, h, no,,, "Activate debugging mode?"
  54 +mode, s, h, ql,,, "Mode of automatic parameters"
  55 +logfile, f, h, ctexpcube.log,,, "Log filename"
src/ctlike/ctlike.par
  View file @c65f2ac
@@ -16,17 +16,17 @@ @@ -16,17 +16,17 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "events.fits",,, "Input event list, counts cube or observation definition XML file"  
20 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Input model definition XML file"  
21 -expcube, f, a, "NONE",,, "Input exposure cube file"  
22 -psfcube, f, a, "NONE",,, "Input PSF cube file"  
23 -edispcube, f, a, "NONE",,, "Input energy dispersion cube file"  
24 -bkgcube, f, a, "NONE",,, "Input background cube file"  
25 -caldb, s, a, "prod2",,, "Calibration database"  
26 -irf, s, a, "South_0.5h",,, "Instrument response function" 19 +inobs, f, a, events.fits,,, "Input event list, counts cube or observation definition XML file"
  20 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file"
  21 +expcube, f, a, NONE,,, "Input exposure cube file"
  22 +psfcube, f, a, NONE,,, "Input PSF cube file"
  23 +edispcube, f, a, NONE,,, "Input energy dispersion cube file"
  24 +bkgcube, f, a, NONE,,, "Input background cube file"
  25 +caldb, s, a, prod2,,, "Calibration database"
  26 +irf, s, a, South_0.5h,,, "Instrument response function"
27 edisp, b, h, no,,, "Apply energy dispersion?" 27 edisp, b, h, no,,, "Apply energy dispersion?"
28 -outmodel, f, a, "crab_results.xml",,, "Output model definition XML file"  
29 -outcovmat, f, h, "NONE",,, "Output covariance matrix FITS file" 28 +outmodel, f, a, crab_results.xml,,, "Output model definition XML file"
  29 +outcovmat, f, h, NONE,,, "Output covariance matrix FITS file"
30 30
31 # 31 #
32 # Maximisation parameters 32 # Maximisation parameters
@@ -40,6 +40,6 @@ fix_spat_for_ts, b, h, no,,, &quot;Fix spatial parameters for TS computation?&quot; @@ -40,6 +40,6 @@ fix_spat_for_ts, b, h, no,,, &quot;Fix spatial parameters for TS computation?&quot;
40 #==================== 40 #====================
41 chatter, i, h, 2,0,4, "Chattiness of output" 41 chatter, i, h, 2,0,4, "Chattiness of output"
42 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 42 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
43 -debug, b, h, no,,, "Debugging mode activated"  
44 -mode, s, h, "ql",,, "Mode of automatic parameters"  
45 -logfile, f, h, "ctlike.log",,, "Log filename" 43 +debug, b, h, no,,, "Activate debugging mode?"
  44 +mode, s, h, ql,,, "Mode of automatic parameters"
  45 +logfile, f, h, ctlike.log,,, "Log filename"
src/ctmapcube/ctmapcube.par
  View file @c65f2ac
@@ -16,16 +16,16 @@ @@ -16,16 +16,16 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Input model definition XML file"  
20 -outcube, f, a, "mapcube.fits",,, "Output map cube file" 19 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file"
  20 +outcube, f, a, mapcube.fits,,, "Output map cube file"
21 ptsrcsig, r, h, 1.0,0,60, "Point source Gaussian sigma in arcmin" 21 ptsrcsig, r, h, 1.0,0,60, "Point source Gaussian sigma in arcmin"
22 22
23 # 23 #
24 # Energy binning parameters 24 # Energy binning parameters
25 #========================== 25 #==========================
26 ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins" 26 ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
27 -emin, r, a, 0.1,,, "Start value for first energy bin in TeV"  
28 -emax, r, a, 100.0,,, "Stop value for last energy bin in TeV" 27 +emin, r, a, 0.1,,, "Lower energy limit (TeV)"
  28 +emax, r, a, 100.0,,, "Upper energy limit (TeV)"
29 enumbins, i, a, 20,1,200, "Number of energy bins" 29 enumbins, i, a, 20,1,200, "Number of energy bins"
30 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition" 30 ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
31 31
@@ -46,6 +46,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC @@ -46,6 +46,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC
46 publish, b, h, no,,, "Publish map cube on VO Hub?" 46 publish, b, h, no,,, "Publish map cube on VO Hub?"
47 chatter, i, h, 2,0,4, "Chattiness of output" 47 chatter, i, h, 2,0,4, "Chattiness of output"
48 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 48 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
49 -debug, b, h, no,,, "Debugging mode activated"  
50 -mode, s, h, "ql",,, "Mode of automatic parameters"  
51 -logfile, f, h, "ctmapcube.log",,, "Log filename" 49 +debug, b, h, no,,, "Activate debugging mode?"
  50 +mode, s, h, ql,,, "Mode of automatic parameters"
  51 +logfile, f, h, ctmapcube.log,,, "Log filename"
src/ctmodel/ctmodel.par
  View file @c65f2ac
@@ -16,17 +16,17 @@ @@ -16,17 +16,17 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "NONE",,, "Input event list, counts cube or observation definition XML file"  
20 -incube, f, a, "NONE",,, "Input counts cube file to extract model cube definition"  
21 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Input model definition XML file"  
22 -expcube, f, a, "NONE",,, "Input exposure cube file"  
23 -psfcube, f, a, "NONE",,, "Input PSF cube file"  
24 -edispcube,f, a, "NONE",,, "Input energy dispersion cube file"  
25 -bkgcube, f, a, "NONE",,, "Input background cube file"  
26 -caldb, s, a, "prod2",,, "Calibration database"  
27 -irf, s, a, "South_0.5h",,, "Instrument response function" 19 +inobs, f, a, NONE,,, "Input event list, counts cube or observation definition XML file"
  20 +incube, f, a, NONE,,, "Input counts cube file to extract model cube definition"
  21 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file"
  22 +expcube, f, a, NONE,,, "Input exposure cube file"
  23 +psfcube, f, a, NONE,,, "Input PSF cube file"
  24 +edispcube,f, a, NONE,,, "Input energy dispersion cube file"
  25 +bkgcube, f, a, NONE,,, "Input background cube file"
  26 +caldb, s, a, prod2,,, "Calibration database"
  27 +irf, s, a, South_0.5h,,, "Instrument response function"
28 edisp, b, h, no,,, "Apply energy dispersion?" 28 edisp, b, h, no,,, "Apply energy dispersion?"
29 -outcube, f, a, "modcube.fits",,, "Output model cube file" 29 +outcube, f, a, modcube.fits,,, "Output model cube file"
30 30
31 # 31 #
32 # Observation parameters 32 # Observation parameters
@@ -41,11 +41,11 @@ deadc, r, h, 0.98,0,1, &quot;Average deadtime correction factor&quot; @@ -41,11 +41,11 @@ deadc, r, h, 0.98,0,1, &quot;Average deadtime correction factor&quot;
41 # 41 #
42 # Energy binning parameters 42 # Energy binning parameters
43 #========================== 43 #==========================
44 -ebinalg, s, h, "LOG",FILE|LIN|LOG,, "Algorithm for defining energy bins"  
45 -emin, r, a, 0.1,,, "Start value for first energy bin in TeV"  
46 -emax, r, a, 100.0,,, "Stop value for last energy bin in TeV"  
47 -enumbins, i, a, 20,,, "Number of energy bins"  
48 -ebinfile, f, h, "NONE",,, "Name of the file containing the energy bin definition" 44 +ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
  45 +emin, r, a, 0.1,,, "Lower energy limit (TeV)"
  46 +emax, r, a, 100.0,,, "Upper energy limit (TeV)"
  47 +enumbins, i, a, 20,1,200, "Number of energy bins"
  48 +ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
49 49
50 # 50 #
51 # Spatial binning parameters 51 # Spatial binning parameters
@@ -65,6 +65,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC @@ -65,6 +65,6 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DEC
65 publish, b, h, no,,, "Publish model cube on VO Hub?" 65 publish, b, h, no,,, "Publish model cube on VO Hub?"
66 chatter, i, h, 2,0,4, "Chattiness of output" 66 chatter, i, h, 2,0,4, "Chattiness of output"
67 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 67 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
68 -debug, b, h, no,,, "Debugging mode activated"  
69 -mode, s, h, "ql",,, "Mode of automatic parameters"  
70 -logfile, f, h, "ctmodel.log",,, "Log filename" 68 +debug, b, h, no,,, "Activate debugging mode?"
  69 +mode, s, h, ql,,, "Mode of automatic parameters"
  70 +logfile, f, h, ctmodel.log,,, "Log filename"
src/ctobssim/ctobssim.par
  View file @c65f2ac
@@ -46,6 +46,6 @@ eslices, i, h, 10,1,100, &quot;Number of energy slices&quot; @@ -46,6 +46,6 @@ eslices, i, h, 10,1,100, &quot;Number of energy slices&quot;
46 publish, b, h, no,,, "Publish event list on VO Hub?" 46 publish, b, h, no,,, "Publish event list on VO Hub?"
47 chatter, i, h, 2,0,4, "Chattiness of output" 47 chatter, i, h, 2,0,4, "Chattiness of output"
48 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 48 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
49 -debug, b, h, no,,, "Debugging mode activated" 49 +debug, b, h, no,,, "Activate debugging mode?"
50 mode, s, h, ql,,, "Mode of automatic parameters" 50 mode, s, h, ql,,, "Mode of automatic parameters"
51 logfile, f, h, ctobssim.log,,, "Log filename" 51 logfile, f, h, ctobssim.log,,, "Log filename"
src/ctphase/ctphase.par
  View file @c65f2ac
@@ -16,11 +16,11 @@ @@ -16,11 +16,11 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "events.fits",,, "Input event list or observation definition XML file"  
20 -outobs, f, a, "phased_events.fits",,, "Output event list or observation definition XML file"  
21 -prefix, s, h, "phased_",,, "Prefix for event lists in observation definition XML file"  
22 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Model definition XML file"  
23 -srcname, s, a, "Crab",,, "Source in model definition XML file to use for phase computation" 19 +inobs, f, a, events.fits,,, "Input event list or observation definition XML file"
  20 +outobs, f, a, phased_events.fits,,, "Output event list or observation definition XML file"
  21 +prefix, s, h, phased_,,, "Prefix for event lists in observation definition XML file"
  22 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Model definition XML file"
  23 +srcname, s, a, Crab,,, "Source in model definition XML file to use for phase computation"
24 24
25 # 25 #
26 # Phase information parameters 26 # Phase information parameters
@@ -37,6 +37,6 @@ f2, r, a, 0.01,,, &quot;Second frequency derivative at reference MJD (s^-3)&quot; @@ -37,6 +37,6 @@ f2, r, a, 0.01,,, &quot;Second frequency derivative at reference MJD (s^-3)&quot;
37 publish, b, h, no,,, "Publish event list on VO Hub?" 37 publish, b, h, no,,, "Publish event list on VO Hub?"
38 chatter, i, h, 2,0,4, "Chattiness of output" 38 chatter, i, h, 2,0,4, "Chattiness of output"
39 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 39 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
40 -debug, b, h, no,,, "Debugging mode activated"  
41 -mode, s, h, "ql",,, "Mode of automatic parameters"  
42 -logfile, f, h, "ctphase.log",,, "Log filename" 40 +debug, b, h, no,,, "Activate debugging mode?"
  41 +mode, s, h, ql,,, "Mode of automatic parameters"
  42 +logfile, f, h, ctphase.log,,, "Log filename"
src/ctprob/ctprob.par
  View file @c65f2ac
@@ -16,12 +16,12 @@ @@ -16,12 +16,12 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "events.fits",,, "Input event list or observation definition XML file"  
20 -outobs, f, a, "prob_events.fits",,, "Output event list or observation definition XML file"  
21 -prefix, s, h, "prob_",,, "Prefix for event lists in observation definition XML file"  
22 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Input model definition XML file"  
23 -caldb, s, a, "prod2",,, "Calibration database"  
24 -irf, s, a, "South_0.5h",,, "Instrument response function" 19 +inobs, f, a, events.fits,,, "Input event list or observation definition XML file"
  20 +outobs, f, a, prob_events.fits,,, "Output event list or observation definition XML file"
  21 +prefix, s, h, prob_,,, "Prefix for event lists in observation definition XML file"
  22 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file"
  23 +caldb, s, a, prod2,,, "Calibration database"
  24 +irf, s, a, South_0.5h,,, "Instrument response function"
25 edisp, b, h, no,,, "Apply energy dispersion?" 25 edisp, b, h, no,,, "Apply energy dispersion?"
26 26
27 # 27 #
@@ -30,6 +30,6 @@ edisp, b, h, no,,, &quot;Apply energy dispersion?&quot; @@ -30,6 +30,6 @@ edisp, b, h, no,,, &quot;Apply energy dispersion?&quot;
30 publish, b, h, no,,, "Publish event list on VO Hub?" 30 publish, b, h, no,,, "Publish event list on VO Hub?"
31 chatter, i, h, 2,0,4, "Chattiness of output" 31 chatter, i, h, 2,0,4, "Chattiness of output"
32 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 32 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
33 -debug, b, h, no,,, "Debugging mode activated"  
34 -mode, s, h, "ql",,, "Mode of automatic parameters"  
35 -logfile, f, h, "ctprob.log",,, "Log filename" 33 +debug, b, h, no,,, "Activate debugging mode?"
  34 +mode, s, h, ql,,, "Mode of automatic parameters"
  35 +logfile, f, h, ctprob.log,,, "Log filename"
src/ctpsfcube/ctpsfcube.par
  View file @c65f2ac
@@ -16,20 +16,20 @@ @@ -16,20 +16,20 @@
16 # 16 #
17 # Observational parameters 17 # Observational parameters
18 #=================== 18 #===================
19 -inobs, f, a, "NONE",,, "Input event list or observation definition XML file"  
20 -incube, f, a, "NONE",,, "Input counts cube file to extract PSF cube definition"  
21 -caldb, s, a, "prod2",,, "Calibration database"  
22 -irf, s, a, "South_0.5h",,, "Instrument response function"  
23 -outcube, f, a, "psfcube.fits",,, "Output PSF cube file" 19 +inobs, f, a, NONE,,, "Input event list or observation definition XML file"
  20 +incube, f, a, NONE,,, "Input counts cube file to extract PSF cube definition"
  21 +caldb, s, a, prod2,,, "Calibration database"
  22 +irf, s, a, South_0.5h,,, "Instrument response function"
  23 +outcube, f, a, psfcube.fits,,, "Output PSF cube file"
24 24
25 # 25 #
26 # Energy binning parameters 26 # Energy binning parameters
27 #========================== 27 #==========================
28 -ebinalg, s, h, "LOG", FILE|LIN|LOG,, "Algorithm for defining energy bins" 28 +ebinalg, s, a, LOG,FILE|LIN|LOG,, "Algorithm for defining energy bins"
29 emin, r, a, 0.1,,, "Lower energy limit (TeV)" 29 emin, r, a, 0.1,,, "Lower energy limit (TeV)"
30 emax, r, a, 100.0,,, "Upper energy limit (TeV)" 30 emax, r, a, 100.0,,, "Upper energy limit (TeV)"
31 -enumbins, i, a, 20,,, "Number of energy bins"  
32 -ebinfile, f, h, "NONE",,, "Name of the file containing the energy bin definition" 31 +enumbins, i, a, 20,1,200, "Number of energy bins"
  32 +ebinfile, f, a, NONE,,, "Name of the file containing the energy bin definition"
33 addbounds, b, h, no,,, "Add energies at observation energy boundaries?" 33 addbounds, b, h, no,,, "Add energies at observation energy boundaries?"
34 34
35 # 35 #
@@ -55,6 +55,6 @@ anumbins, i, h, 200,,, &quot;Number of angular separation bins&quot; @@ -55,6 +55,6 @@ anumbins, i, h, 200,,, &quot;Number of angular separation bins&quot;
55 #==================== 55 #====================
56 chatter, i, h, 2,0,4, "Chattiness of output" 56 chatter, i, h, 2,0,4, "Chattiness of output"
57 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 57 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
58 -debug, b, h, no,,, "Debugging mode activated"  
59 -mode, s, h, "ql",,, "Mode of automatic parameters"  
60 -logfile, f, h, "ctpsfcube.log",,, "Log filename" 58 +debug, b, h, no,,, "Activate debugging mode?"
  59 +mode, s, h, ql,,, "Mode of automatic parameters"
  60 +logfile, f, h, ctpsfcube.log,,, "Log filename"
src/ctselect/ctselect.par
  View file @c65f2ac
@@ -16,9 +16,9 @@ @@ -16,9 +16,9 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "events.fits",,, "Input event list or observation definition XML file"  
20 -outobs, f, a, "selected_events.fits",,, "Output event list or observation definition XML file"  
21 -prefix, s, h, "selected_",,, "Prefix for event lists in observation definition XML file" 19 +inobs, f, a, events.fits,,, "Input event list or observation definition XML file"
  20 +outobs, f, a, selected_events.fits,,, "Output event list or observation definition XML file"
  21 +prefix, s, h, selected_,,, "Prefix for event lists in observation definition XML file"
22 22
23 # 23 #
24 # Selection parameters 24 # Selection parameters
@@ -41,6 +41,6 @@ usethres,s, h, NONE,NONE|DEFAULT|USER,, &quot;Energy threshold type&quot; @@ -41,6 +41,6 @@ usethres,s, h, NONE,NONE|DEFAULT|USER,, &quot;Energy threshold type&quot;
41 publish, b, h, no,,, "Publish event list on VO Hub?" 41 publish, b, h, no,,, "Publish event list on VO Hub?"
42 chatter, i, h, 2,0,4, "Chattiness of output" 42 chatter, i, h, 2,0,4, "Chattiness of output"
43 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 43 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
44 -debug, b, h, no,,, "Debugging mode activated"  
45 -mode, s, h, "ql",,, "Mode of automatic parameters"  
46 -logfile, f, h, "ctselect.log",,, "Log filename" 44 +debug, b, h, no,,, "Activate debugging mode?"
  45 +mode, s, h, ql,,, "Mode of automatic parameters"
  46 +logfile, f, h, ctselect.log,,, "Log filename"
src/ctskymap/ctskymap.par
  View file @c65f2ac
@@ -16,10 +16,10 @@ @@ -16,10 +16,10 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "events.fits",,, "Input event list or observation definition XML file"  
20 -caldb, s, a, "prod2",,, "Calibration database"  
21 -irf, s, a, "South_0.5h",,, "Instrument response function"  
22 -outmap, f, a, "skymap.fits",,, "Output skymap file" 19 +inobs, f, a, events.fits,,, "Input event list or observation definition XML file"
  20 +caldb, s, a, prod2,,, "Calibration database"
  21 +irf, s, a, South_0.5h,,, "Instrument response function"
  22 +outmap, f, a, skymap.fits,,, "Output skymap file"
23 23
24 # 24 #
25 # Event selection parameters 25 # Event selection parameters
@@ -54,6 +54,6 @@ inexclusion, f, h, NONE,,, &quot;Exclusion map or DS9 region file name&quot; @@ -54,6 +54,6 @@ inexclusion, f, h, NONE,,, &quot;Exclusion map or DS9 region file name&quot;
54 publish, b, h, no,,, "Publish sky map on VO Hub?" 54 publish, b, h, no,,, "Publish sky map on VO Hub?"
55 chatter, i, h, 2,0,4, "Chattiness of output" 55 chatter, i, h, 2,0,4, "Chattiness of output"
56 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 56 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
57 -debug, b, h, no,,, "Debugging mode activated"  
58 -mode, s, h, "ql",,, "Mode of automatic parameters"  
59 -logfile, f, h, "ctskymap.log",,, "Log filename" 57 +debug, b, h, no,,, "Activate debugging mode?"
  58 +mode, s, h, ql,,, "Mode of automatic parameters"
  59 +logfile, f, h, ctskymap.log,,, "Log filename"
src/cttsmap/cttsmap.par
  View file @c65f2ac
@@ -16,17 +16,17 @@ @@ -16,17 +16,17 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "events.fits",,, "Input event list, counts cube or observation definition XML file"  
20 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Input model definition XML file"  
21 -srcname, s, a, "Crab",,, "Test source name"  
22 -expcube, f, a, "NONE",,, "Input exposure cube file"  
23 -psfcube, f, a, "NONE",,, "Input PSF cube file"  
24 -edispcube, f, a, "NONE",,, "Input energy dispersion cube file"  
25 -bkgcube, f, a, "NONE",,, "Input background cube file"  
26 -caldb, s, a, "prod2",,, "Calibration database"  
27 -irf, s, a, "South_0.5h",,, "Instrument response function" 19 +inobs, f, a, events.fits,,, "Input event list, counts cube or observation definition XML file"
  20 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file"
  21 +srcname, s, a, Crab,,, "Test source name"
  22 +expcube, f, a, NONE,,, "Input exposure cube file"
  23 +psfcube, f, a, NONE,,, "Input PSF cube file"
  24 +edispcube, f, a, NONE,,, "Input energy dispersion cube file"
  25 +bkgcube, f, a, NONE,,, "Input background cube file"
  26 +caldb, s, a, prod2,,, "Calibration database"
  27 +irf, s, a, South_0.5h,,, "Instrument response function"
28 edisp, b, h, no,,, "Apply energy dispersion?" 28 edisp, b, h, no,,, "Apply energy dispersion?"
29 -outmap, f, a, "tsmap.fits",,, "Output Test Statistic map file" 29 +outmap, f, a, tsmap.fits,,, "Output Test Statistic map file"
30 30
31 # 31 #
32 # TS map computation parameters 32 # TS map computation parameters
@@ -51,7 +51,7 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DE @@ -51,7 +51,7 @@ yref, r, a, 22.01,-90,90, &quot;Second coordinate of image center in degrees (DE
51 #=========================================== 51 #===========================================
52 binmin, i, h, -1,,, "First bin to compute" 52 binmin, i, h, -1,,, "First bin to compute"
53 binmax, i, h, -1,,, "Last bin to compute" 53 binmax, i, h, -1,,, "Last bin to compute"
54 -logL0, r, h, 0.0,,, "LogLikelihood value of null hypothesis" 54 +logL0, r, h, 0.0,,, "Log-likelihood value of null hypothesis"
55 55
56 # 56 #
57 # Standard parameters 57 # Standard parameters
@@ -59,6 +59,6 @@ logL0, r, h, 0.0,,, &quot;LogLikelihood value of null hypothesis&quot; @@ -59,6 +59,6 @@ logL0, r, h, 0.0,,, &quot;LogLikelihood value of null hypothesis&quot;
59 publish, b, h, no,,, "Publish Test Statistic map on VO Hub?" 59 publish, b, h, no,,, "Publish Test Statistic map on VO Hub?"
60 chatter, i, h, 2,0,4, "Chattiness of output" 60 chatter, i, h, 2,0,4, "Chattiness of output"
61 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 61 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
62 -debug, b, h, no,,, "Debugging mode activated"  
63 -mode, s, h, "ql",,, "Mode of automatic parameters"  
64 -logfile, f, h, "cttsmap.log",,, "Log filename" 62 +debug, b, h, no,,, "Activate debugging mode?"
  63 +mode, s, h, ql,,, "Mode of automatic parameters"
  64 +logfile, f, h, cttsmap.log,,, "Log filename"
src/ctulimit/ctulimit.par
  View file @c65f2ac
@@ -16,15 +16,15 @@ @@ -16,15 +16,15 @@
16 # 16 #
17 # General parameters 17 # General parameters
18 #=================== 18 #===================
19 -inobs, f, a, "events.fits",,, "Input event list, counts cube or observation definition XML file"  
20 -inmodel, f, a, "$CTOOLS/share/models/crab.xml",,, "Input model definition XML file"  
21 -srcname, s, a, "Crab",,, "Source of interest"  
22 -expcube, f, a, "NONE",,, "Input exposure cube file"  
23 -psfcube, f, a, "NONE",,, "Input PSF cube file"  
24 -edispcube,f, a, "NONE",,, "Input energy dispersion cube file"  
25 -bkgcube, f, a, "NONE",,, "Input background cube file"  
26 -caldb, s, a, "prod2",,, "Calibration database"  
27 -irf, s, a, "South_0.5h",,, "Instrument response function" 19 +inobs, f, a, events.fits,,, "Input event list, counts cube or observation definition XML file"
  20 +inmodel, f, a, $CTOOLS/share/models/crab.xml,,, "Input model definition XML file"
  21 +srcname, s, a, Crab,,, "Source of interest"
  22 +expcube, f, a, NONE,,, "Input exposure cube file"
  23 +psfcube, f, a, NONE,,, "Input PSF cube file"
  24 +edispcube,f, a, NONE,,, "Input energy dispersion cube file"
  25 +bkgcube, f, a, NONE,,, "Input background cube file"
  26 +caldb, s, a, prod2,,, "Calibration database"
  27 +irf, s, a, South_0.5h,,, "Instrument response function"
28 edisp, b, h, no,,, "Apply energy dispersion?" 28 edisp, b, h, no,,, "Apply energy dispersion?"
29 29
30 # 30 #
@@ -45,6 +45,6 @@ max_iter, i, h, 50,1,1000, &quot;Maximum number of iterations&quot; @@ -45,6 +45,6 @@ max_iter, i, h, 50,1,1000, &quot;Maximum number of iterations&quot;
45 #==================== 45 #====================
46 chatter, i, h, 2,0,4, "Chattiness of output" 46 chatter, i, h, 2,0,4, "Chattiness of output"
47 clobber, b, h, yes,,, "Overwrite existing output files with new output files?" 47 clobber, b, h, yes,,, "Overwrite existing output files with new output files?"
48 -debug, b, h, no,,, "Debugging mode activated"  
49 -mode, s, h, "ql",,, "Mode of automatic parameters"  
50 -logfile, f, h, "ctulimit.log",,, "Log filename" 48 +debug, b, h, no,,, "Activate debugging mode?"
  49 +mode, s, h, ql,,, "Mode of automatic parameters"
  50 +logfile, f, h, ctulimit.log,,, "Log filename"