Add helpful tips to User documentation

Jürgen Knödlseder
1 parent 7bad2878
Showing 2 changed files with 85 additions and 0 deletions
doc/source/users/index.rst
doc/source/users/tips/index.rst
@@ -6,6 +6,7 @@ User Documentation
 .. toctree::
    :maxdepth: 1
  
+   tips/index
    tutorials/index
    user_manual/index
    reference_manual/index
+.. _sec_tips:
+
+Helpful tips
+============
+
+This page summarises things that you **definitely should consider** when using
+the ctools software. Make sure that you read at least this section.
+
+- :ref:`Always inspect your fit residuals <tip_residuals>`
+- :ref:`Make sure your binning is sufficiently fine grained <tip_binned>`
+- :ref:`Only use energy dispersion when you really need it <tip_edisp>`
+- :ref:`Only compute the Test Statistics when you really need it <tip_ts>`
+- :ref:`Fit extended source with a radial disk model <tip_disk>`
+- :ref:`Fix the spectral parameters of a source to compute an upper limit <tip_ulimit>`
+
+
+
+.. _tip_residuals:
+
+.. topic:: Always inspect your fit residuals
+
+   **Never** trust the values of a :ref:`ctlike` model fit without having
+   inspected the fit residuals. Residuals in the region of your source of
+   interest should be flat.
+
+
+.. _tip_binned:
+
+.. topic:: Make sure your binning is sufficiently fine grained
+
+   If you use binned analysis, make sure that the bin size is sufficiently fine
+   grained, since the model is sampled at the bin centres. A spatial binning of
+   0.02 degrees should be okay. Use at least 10 bins per decade for the energy
+   binning, you may consider using more bins below 100 GeV when you analyse
+   data near the energy threshold.
+
+
+.. _tip_edisp:
+
+.. topic:: Only use energy dispersion when you really need it
+
+   You should only use the energy dispersion when you are sure that it
+   impacts significantly the analysis results, or when you want to produce
+   final results for a publication. Taking into account energy dispersion
+   adds a further dimension to the analysis which considerably slows down the
+   computations. In many cases the impact of the energy dispersion is small
+   and can in a first order be neglected.
+
+
+.. _tip_ts:
+
+.. topic:: Only compute the Test Statistics when you really need it
+
+   The Test Statistic value is useful for computing the detection significance
+   of a source, but for many sources in your region of interest you may actually
+   not be interested in that value. Computation of the Test Statistic value
+   takes some extra time, so do not request the computation if you don't reaaly
+   need it.
+
+
+.. _tip_disk:
+
+.. topic:: Fit extended sources with a radial disk model
+
+   The fit of extended sources is best done with a radial disk model since the
+   computations for this model are very fast (model type: ``RadialDisk``). Only
+   if the radial disk model is a bad representation of the spatial distribution
+   or to compute final values for a publication you should switch to other
+   extended models, such as the ``RadialGaussian`` or ``RadialShell`` models.
+   Note that the computations for elliptical models are even slower,
+   hence use these models only when you really need them, and prefer the
+   elliptical disk over the elliptical Gaussian model.
+
+
+.. _tip_ulimit:
+
+.. topic:: Fix the spectral parameters of a source to compute an upper limit
+
+   When computing an upper limit using :ref:`ctulimit`, make sure that the
+   spectral parameters such as index, cutoff energy, etc. are all fixed. Only
+   the prefactor or integrated flux should be left free. Computation of an
+   upper limit requires to make a hypothesis on the underlying spectral energy
+   density distribution, hence you have to fix the parameters of this
+   hypothesis. Otherwise your upper limits are probably rather meaningless.