GModelSpatialDiffuseMap.cpp
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/***************************************************************************
* GModelSpatialDiffuseMap.cpp - Spatial map model class *
* ----------------------------------------------------------------------- *
* copyright (C) 2012-2016 by Juergen Knoedlseder *
* ----------------------------------------------------------------------- *
* *
* This program is free software: you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation, either version 3 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU General Public License for more details. *
* *
* You should have received a copy of the GNU General Public License *
* along with this program. If not, see <http://www.gnu.org/licenses/>. *
* *
***************************************************************************/
/**
* @file GModelSpatialDiffuseMap.cpp
* @brief Spatial map model class implementation
* @author Juergen Knoedlseder
*/
/* __ Includes ___________________________________________________________ */
#ifdef HAVE_CONFIG_H
#include <config.h>
#endif
#include "GException.hpp"
#include "GTools.hpp"
#include "GMath.hpp"
#include "GHealpix.hpp"
#include "GModelSpatialDiffuseMap.hpp"
#include "GModelSpatialRegistry.hpp"
/* __ Constants __________________________________________________________ */
/* __ Globals ____________________________________________________________ */
const GModelSpatialDiffuseMap g_spatial_map_seed;
const GModelSpatialRegistry g_spatial_map_registry(&g_spatial_map_seed);
#if defined(G_LEGACY_XML_FORMAT)
const GModelSpatialDiffuseMap g_spatial_map_legacy_seed(true, "SpatialMap");
const GModelSpatialRegistry g_spatial_map_legacy_registry(&g_spatial_map_legacy_seed);
#endif
/* __ Method name definitions ____________________________________________ */
#define G_MC "GModelSpatialDiffuseMap::mc(GEnergy&, GTime&, GRan&)"
#define G_READ "GModelSpatialDiffuseMap::read(GXmlElement&)"
#define G_WRITE "GModelSpatialDiffuseMap::write(GXmlElement&)"
/* __ Macros _____________________________________________________________ */
/* __ Coding definitions _________________________________________________ */
/* __ Debug definitions __________________________________________________ */
//#define G_DEBUG_MC //!< Debug MC method
//#define G_DEBUG_MC_CACHE //!< Debug MC cache
/*==========================================================================
= =
= Constructors/destructors =
= =
==========================================================================*/
/***********************************************************************//**
* @brief Void constructor
*
* Constructs empty spatial map model.
***************************************************************************/
GModelSpatialDiffuseMap::GModelSpatialDiffuseMap(void) :
GModelSpatialDiffuse()
{
// Initialise members
init_members();
// Return
return;
}
/***********************************************************************//**
* @brief Model type constructor
*
* @param[in] dummy Dummy flag.
* @param[in] type Model type.
*
* Constructs empty spatial map model by specifying a model @p type.
***************************************************************************/
GModelSpatialDiffuseMap::GModelSpatialDiffuseMap(const bool& dummy,
const std::string& type) :
GModelSpatialDiffuse()
{
// Initialise members
init_members();
// Set model type
m_type = type;
// Return
return;
}
/***********************************************************************//**
* @brief XML constructor
*
* @param[in] xml XML element.
*
* Constructs spatial map model by extracting information from an XML
* element. See the read() method for more information about the expected
* structure of the XML element.
***************************************************************************/
GModelSpatialDiffuseMap::GModelSpatialDiffuseMap(const GXmlElement& xml) :
GModelSpatialDiffuse()
{
// Initialise members
init_members();
// Read information from XML element
read(xml);
// Return
return;
}
/***********************************************************************//**
* @brief File name constructor
*
* @param[in] filename File name.
* @param[in] value Normalization factor.
* @param[in] normalize Normalize map?
*
* Constructs spatial map model by loading a sky map from the file specified
* by @p filename and by setting the @p value by which the map will be
* multiplied (or normalized).
***************************************************************************/
GModelSpatialDiffuseMap::GModelSpatialDiffuseMap(const GFilename& filename,
const double& value,
const bool& normalize) :
GModelSpatialDiffuse()
{
// Initialise members
init_members();
// Set normalisation parameter
m_value.value(value);
// Set normalization flag
m_normalize = normalize;
// Load sky map
load(filename);
// Return
return;
}
/***********************************************************************//**
* @brief Sky map constructor
*
* @param[in] map Sky map.
* @param[in] value Normalization factor.
* @param[in] normalize Normalize map.
*
* Constructs spatial map model by setting the sky @p map and by setting the
* @p value by which the map will be multiplied (or normalized).
***************************************************************************/
GModelSpatialDiffuseMap::GModelSpatialDiffuseMap(const GSkyMap& map,
const double& value,
const bool& normalize) :
GModelSpatialDiffuse()
{
// Initialise members
init_members();
// Set normalization parameter
m_value.value(value);
// Set normalization flag
m_normalize = normalize;
// Set sky map
m_map = map;
// Prepare sky map
prepare_map();
// Return
return;
}
/***********************************************************************//**
* @brief Copy constructor
*
* @param[in] model Spatial map model.
*
* Construct a spatial map model by copying another spatial map model.
***************************************************************************/
GModelSpatialDiffuseMap::GModelSpatialDiffuseMap(const GModelSpatialDiffuseMap& model) :
GModelSpatialDiffuse(model)
{
// Initialise members
init_members();
// Copy members
copy_members(model);
// Return
return;
}
/***********************************************************************//**
* @brief Destructor
***************************************************************************/
GModelSpatialDiffuseMap::~GModelSpatialDiffuseMap(void)
{
// Free members
free_members();
// Return
return;
}
/*==========================================================================
= =
= Operators =
= =
==========================================================================*/
/***********************************************************************//**
* @brief Assignment operator
*
* @param[in] model Spatial map model.
* @return Spatial map model.
*
* Assigns a spatial map model to another spatial map model.
***************************************************************************/
GModelSpatialDiffuseMap& GModelSpatialDiffuseMap::operator=(const GModelSpatialDiffuseMap& model)
{
// Execute only if object is not identical
if (this != &model) {
// Copy base class members
this->GModelSpatialDiffuse::operator=(model);
// Free members
free_members();
// Initialise members
init_members();
// Copy members
copy_members(model);
} // endif: object was not identical
// Return
return *this;
}
/*==========================================================================
= =
= Public methods =
= =
==========================================================================*/
/***********************************************************************//**
* @brief Clear spatial map model
***************************************************************************/
void GModelSpatialDiffuseMap::clear(void)
{
// Free class members (base and derived classes, derived class first)
free_members();
this->GModelSpatialDiffuse::free_members();
this->GModelSpatial::free_members();
// Initialise members
this->GModelSpatial::init_members();
this->GModelSpatialDiffuse::init_members();
init_members();
// Return
return;
}
/***********************************************************************//**
* @brief Clone spatial map model
*
* @return Pointer to deep copy of spatial map model.
***************************************************************************/
GModelSpatialDiffuseMap* GModelSpatialDiffuseMap::clone(void) const
{
// Clone diffuse map
return new GModelSpatialDiffuseMap(*this);
}
/***********************************************************************//**
* @brief Return intensity of sky map
*
* @param[in] photon Incident photon.
* @return Sky map intensity (\f$\mbox{ph cm}^{-2}\mbox{sr}^{-1}\mbox{s}^{-1}\f$)
*
* Returns the intensity of the sky map at the specified sky direction
* multiplied by the normalization factor. If the sky direction falls outside
* the sky map, an intensity of 0 is returned.
***************************************************************************/
double GModelSpatialDiffuseMap::eval(const GPhoton& photon) const
{
// Get skymap intensity
double intensity = m_map(photon.dir());
// Return intensity times normalization factor
return (intensity * m_value.value());
}
/***********************************************************************//**
* @brief Return intensity of sky map and gradient
*
* @param[in] photon Incident photon.
* @return Sky map intensity (\f$\mbox{ph cm}^{-2}\mbox{sr}^{-1}\mbox{s}^{-1}\f$)
*
* Returns the intensity of the sky map at the specified sky direction
* multiplied by the normalization factor. The method also sets the gradient
* with respect to the normalization factor. If the sky direction falls
* outside the sky map, an intensity of 0 is returned.
***************************************************************************/
double GModelSpatialDiffuseMap::eval_gradients(const GPhoton& photon) const
{
// Get skymap intensity
double intensity = m_map(photon.dir());
// Compute partial derivatives of the parameter values
double g_value = (m_value.is_free()) ? intensity * m_value.scale() : 0.0;
// Set gradient to 0 (circumvent const correctness)
const_cast<GModelSpatialDiffuseMap*>(this)->m_value.factor_gradient(g_value);
// Return intensity times normalization factor
return (intensity * m_value.value());
}
/***********************************************************************//**
* @brief Returns MC sky direction
*
* @param[in] energy Photon energy (ignored).
* @param[in] time Photon arrival time (ignored).
* @param[in,out] ran Random number generator.
* @return Sky direction.
*
* @exception GException::invalid_value
* Simulation cone not defined or does not overlap with sky map.
* No sky map defined.
*
* Returns a random sky direction according to the intensity distribution of
* the model sky map. The method uses a rejection method to determine the sky
* direction.
***************************************************************************/
GSkyDir GModelSpatialDiffuseMap::mc(const GEnergy& energy,
const GTime& time,
GRan& ran) const
{
// Throw an exception if the maximum MC intensity is not positive. This
// can be the case because the simulation cone has not been defined or
// because it does not overlap with the sky map
if (m_mc_max <= 0.0) {
std::string msg = "Simulation cone has not been defined or does not "
"overlap with the sky map. Please specify a valid "
"simulation cone.";
throw GException::invalid_value(G_MC, msg);
}
// Determine number of skymap pixels
int npix = m_map.npix();
// Throw an exception if there are no sky map pixels
if (npix <= 0) {
std::string msg = "No sky map defined. Please specify a valid sky map.";
throw GException::invalid_value(G_MC, msg);
}
// Allocate sky direction
GSkyDir dir;
// Debug option: initialise counter
#if defined(G_DEBUG_MC)
int num_iterations = 0;
#endif
// Get sky direction
while (true) {
// Debug option: increment counter
#if defined(G_DEBUG_MC)
num_iterations++;
#endif
// Simulate random sky direction within Monte Carlo simulation cone
double theta = std::acos(1.0 - ran.uniform() * m_mc_one_minus_cosrad) *
gammalib::rad2deg;
double phi = 360.0 * ran.uniform();
dir = m_mc_centre;
dir.rotate_deg(phi, theta);
// Get map value at simulated sky direction. If the map value is non-
// positive then simulate a new sky direction.
double value = m_map(dir);
if (value <= 0.0) {
continue;
}
// Get uniform random number
double uniform = ran.uniform() * m_mc_max;
// Exit loop if the random number is not larger than the sky map value
if (uniform <= value) {
break;
}
} // endwhile: loop until sky direction was accepted
// Debug option: log counter
#if defined(G_DEBUG_MC)
std::cout << num_iterations << " ";
#endif
// Return sky direction
return dir;
}
/***********************************************************************//**
* @brief Return normalization of diffuse map for Monte Carlo simulations
*
* @param[in] dir Centre of simulation cone.
* @param[in] radius Radius of simulation cone (degrees).
* @return Normalization.
*
* Returns the normalization of a diffuse map. The normalization is given
* by the model value times the integrated flux in the sky map over a
* circular region.
***************************************************************************/
double GModelSpatialDiffuseMap::mc_norm(const GSkyDir& dir,
const double& radius) const
{
// Set the MC cone
set_mc_cone(dir, radius);
// Retrieve normalization
double norm = m_mc_norm * value();
// Return normalization
return norm;
}
/***********************************************************************//**
* @brief Signals whether model contains sky direction
*
* @param[in] dir Sky direction.
* @param[in] margin Margin to be added to sky direction (degrees)
* @return True if the model contains the sky direction.
*
* Signals whether a sky direction falls within the bounding circle of
* the diffuse map.
***************************************************************************/
bool GModelSpatialDiffuseMap::contains(const GSkyDir& dir,
const double& margin) const
{
// Initialise containment flag
bool contains = false;
// Continue only if radius is positive
if (m_radius > 0.0) {
// Compute distance to centre
double distance = m_centre.dist_deg(dir);
// If distance is smaller than radius plus margin we consider
// the position to be contained within the bounding circle
if (distance < m_radius + margin) {
contains = true;
}
}
// Return containment
return (contains);
}
/***********************************************************************//**
* @brief Read model from XML element
*
* @param[in] xml XML element.
*
* @exception GException::model_invalid_parnum
* Invalid number of model parameters found in XML element.
* @exception GException::model_invalid_parnames
* Invalid model parameter names found in XML element.
*
* Reads the spatial information for a diffuse map from an XML element. The
* expected format of the XML element is
*
* <spatialModel type="DiffuseMap" file="myfile.fits" normalize="1">
* <parameter name="Prefactor" value="1" min="0.1" max="10" scale="1" free="0"/>
* </spatialModel>
*
* or
*
* <spatialModel type="DiffuseMap" file="myfile.fits" normalize="1">
* <parameter name="Normalization" value="1" min="0.1" max="10" scale="1" free="0"/>
* </spatialModel>
*
* The @p file attribute provides the filename of the diffuse map FITS file.
* The filename may be either an absolute filename (starting with '/') or a
* relative filename. If no access path is given, the file is expected to
* reside in the same location as the XML file.
*
* The @p normalize attribute specifies whether the sky map should be
* normalized to unity flux or not. If the attribute is not given, the map
* will be automatically normalized. To prevent normalization,
* @p normalize="0" needs to be specified.
***************************************************************************/
void GModelSpatialDiffuseMap::read(const GXmlElement& xml)
{
// Verify that XML element has exactly 1 parameters
if (xml.elements() != 1 || xml.elements("parameter") != 1) {
throw GException::model_invalid_parnum(G_READ, xml,
"Spatial map model requires exactly 1 parameter.");
}
// Get pointer on model parameter
const GXmlElement* par = xml.element("parameter", 0);
// Get value
if (par->attribute("name") == "Normalization" ||
par->attribute("name") == "Prefactor") {
m_value.read(*par);
}
else {
throw GException::model_invalid_parnames(G_READ, xml,
"Spatial map model requires either \"Prefactor\" or"
" \"Normalization\" parameter.");
}
// Get optional normalization attribute
m_normalize = true;
m_has_normalize = false;
if (xml.has_attribute("normalize")) {
m_has_normalize = true;
std::string arg = xml.attribute("normalize");
if (arg == "0" || gammalib::tolower(arg) == "false") {
m_normalize = false;
}
}
// Load sky map.
load(gammalib::xml_file_expand(xml, xml.attribute("file")));
// Return
return;
}
/***********************************************************************//**
* @brief Write model into XML element
*
* @param[in] xml XML element.
*
* @exception GException::model_invalid_spatial
* Existing XML element is not of type "SpatialMap"
* @exception GException::model_invalid_parnum
* Invalid number of model parameters found in XML element.
* @exception GException::model_invalid_parnames
* Invalid model parameter names found in XML element.
*
* Writes the spatial information for a diffuse map into an XML element. The
* format of the XML element is
*
* <spatialModel type="DiffuseMap" file="myfile.fits" normalize="1">
* <parameter name="Prefactor" value="1" min="0.1" max="10" scale="1" free="0"/>
* </spatialModel>
*
* The @p file attribute provides the filename of the diffuse map FITS file.
* The filename may be either an absolute filename (starting with '/') or a
* relative filename. If no access path is given, the file is expected to
* reside in the same location as the XML file.
*
* The @p normalize attribute specifies whether the sky map should be
* normalized to unity flux or not. The attribute will only be written if the
* normalization is disabled.
***************************************************************************/
void GModelSpatialDiffuseMap::write(GXmlElement& xml) const
{
// Set model type
if (xml.attribute("type") == "") {
xml.attribute("type", type());
}
// Verify model type
if (xml.attribute("type") != type()) {
throw GException::model_invalid_spatial(G_WRITE, xml.attribute("type"),
"Spatial model is not of type \""+type()+"\".");
}
// Set sky map file name
//xml.attribute("file", m_filename);
xml.attribute("file", gammalib::xml_file_reduce(xml, m_filename));
// If XML element has 0 nodes then append parameter node. The name
// of the node is "Prefactor" as this is the Fermi/LAT standard.
// We thus assure that the XML files will be compatible with
// Fermi/LAT.
if (xml.elements() == 0) {
xml.append(GXmlElement("parameter name=\"Prefactor\""));
}
// Verify that XML element has exactly 1 parameter
if (xml.elements() != 1 || xml.elements("parameter") != 1) {
throw GException::model_invalid_parnum(G_WRITE, xml,
"Spatial map model requires exactly 1 parameter.");
}
// Get pointer on model parameter
GXmlElement* par = xml.element("parameter", 0);
// Set or update parameter
if (par->attribute("name") == "Normalization" ||
par->attribute("name") == "Prefactor") {
m_value.write(*par);
}
else {
throw GException::model_invalid_parnames(G_WRITE, xml,
"Spatial map model requires either \"Prefactor\" or"
" \"Normalization\" parameter.");
}
// Set optional normalization attribute
if (m_has_normalize || !m_normalize) {
if (m_normalize) {
xml.attribute("normalize", "1");
}
else {
xml.attribute("normalize", "0");
}
}
// Return
return;
}
/***********************************************************************//**
* @brief Set Monte Carlo simulation cone
*
* @param[in] centre Simulation cone centre.
* @param[in] radius Simulation cone radius (degrees).
*
* Sets the simulation cone centre and radius that defines the directions
* that will be simulated using the mc() method and pre-computes the maximum
* intensity and the spatially integrated flux of the map within the
* simulation cone region.
***************************************************************************/
void GModelSpatialDiffuseMap::set_mc_cone(const GSkyDir& centre,
const double& radius) const
{
// Continue only if the simulation cone has changed
if ((centre != m_mc_centre) || (radius != m_mc_radius)) {
// Save simulation cone definition
m_mc_centre = centre;
m_mc_radius = radius;
// Pre-compute 1 - cosine of radius
m_mc_one_minus_cosrad = 1.0 - std::cos(m_mc_radius*gammalib::deg2rad);
// Initialise map maximum and normalisation
m_mc_max = 0.0;
m_mc_norm = 0.0;
// Determine number of skymap pixels
int npix = m_map.npix();
// Continue only if there are pixels
if (npix > 0) {
// Compute flux and maximum map intensity within the simulation cone
double sum = 0.0;
double sum_map = 0.0;
for (int i = 0; i < npix; ++i) {
// Get map flux, intensity and distance from MC cone centre
double flux = m_map.flux(i);
double intensity = m_map(i);
double distance = centre.dist_deg(m_map.pix2dir(i));
// Add flux if positive
if (flux > 0.0) {
if (distance <= radius) {
sum += flux; // flux within simulation cone
}
sum_map += flux; // total flux
}
// Update maximum intensity
if (distance <= radius) {
if (intensity > m_mc_max) {
m_mc_max = intensity;
}
}
} // endfor: looped over all map pixels
// Set the normalization factor for the MC simulations. In case
// that the map is normalised, this is the fraction of the flux
// that is comprised within the simulation cone. For non-normalised
// maps, this is simply the flux comprised within the simulation
// cone.
if (sum_map > 0.0) {
if (m_normalize) {
m_mc_norm = sum / sum_map;
}
else {
m_mc_norm = sum;
}
}
// Log maximum intensity and total flux for debugging
#if defined(G_DEBUG_MC_CACHE)
std::cout << "GModelSpatialDiffuseMap::set_mc_cone:" << std::endl;
std::cout << " Maximum map intensity:";
std::cout << m_mc_max << " ph/cm2/s/sr" << std::endl;
std::cout << " Spatially integrated flux:" << std::endl;
std::cout << sum << " ph/cm2/s" << std::endl;
std::cout << " Map normalisation:" << std::endl;
std::cout << m_mc_norm << " ph/cm2/s" << std::endl;
#endif
} // endif: there were map pixels
} // endif: simulation cone has changed
// Return
return;
}
/***********************************************************************//**
* @brief Print map information
*
* @param[in] chatter Chattiness.
* @return String with diffuse map model information.
***************************************************************************/
std::string GModelSpatialDiffuseMap::print(const GChatter& chatter) const
{
// Initialise result string
std::string result;
// Continue only if chatter is not silent
if (chatter != SILENT) {
// Append header
result.append("=== GModelSpatialDiffuseMap ===");
// Append parameters
result.append("\n"+gammalib::parformat("Sky map file"));
result.append(m_filename);
result.append("\n"+gammalib::parformat("Map normalization"));
result.append(gammalib::str(m_mc_norm)+" ph/cm2/s");
if (normalize()) {
result.append(" [normalized]");
}
result.append("\n"+gammalib::parformat("Map centre"));
result.append(m_centre.print());
result.append("\n"+gammalib::parformat("Map radius"));
result.append(gammalib::str(m_radius)+" deg");
result.append("\n"+gammalib::parformat("Number of parameters"));
result.append(gammalib::str(size()));
for (int i = 0; i < size(); ++i) {
result.append("\n"+m_pars[i]->print(chatter));
}
} // endif: chatter was not silent
// Return result
return result;
}
/***********************************************************************//**
* @brief Load skymap into the model class
*
* @param[in] filename Sky map file.
*
* Loads skymap into the model class. The method calls the protected method
* prepare_map() that prepares the map for usage by the class.
***************************************************************************/
void GModelSpatialDiffuseMap::load(const GFilename& filename)
{
// Initialise skymap
m_map.clear();
// Store filename of skymap (for XML writing). Note that we do not
// expand any environment variable at this level, so that if we write
// back the XML element we write the filepath with the environment
// variables
m_filename = filename;
// Load sky map
m_map.load(m_filename);
// Prepare sky map
prepare_map();
// Return
return;
}
/*==========================================================================
= =
= Private methods =
= =
==========================================================================*/
/***********************************************************************//**
* @brief Initialise class members
***************************************************************************/
void GModelSpatialDiffuseMap::init_members(void)
{
// Initialise model type
m_type = "DiffuseMap";
// Initialise Value
m_value.clear();
m_value.name("Prefactor");
m_value.value(1.0);
m_value.scale(1.0);
m_value.range(0.001, 1000.0);
m_value.gradient(0.0);
m_value.fix();
m_value.has_grad(true);
// Set parameter pointer(s)
m_pars.clear();
m_pars.push_back(&m_value);
// Initialise other members
m_map.clear();
m_filename.clear();
m_normalize = true;
m_has_normalize = false;
m_centre.clear();
m_radius = 0.0;
// Initialise MC cache
m_mc_centre.clear();
m_mc_radius = -1.0; //!< Signal initialisation
m_mc_one_minus_cosrad = 1.0;
m_mc_norm = 0.0;
m_mc_max = 0.0;
// Return
return;
}
/***********************************************************************//**
* @brief Copy class members
*
* @param[in] model Spatial map cube model.
***************************************************************************/
void GModelSpatialDiffuseMap::copy_members(const GModelSpatialDiffuseMap& model)
{
// Copy members
m_type = model.m_type;
m_value = model.m_value;
m_map = model.m_map;
m_filename = model.m_filename;
m_normalize = model.m_normalize;
m_has_normalize = model.m_has_normalize;
m_centre = model.m_centre;
m_radius = model.m_radius;
// Copy MC cache
m_mc_centre = model.m_mc_centre;
m_mc_radius = model.m_mc_radius;
m_mc_one_minus_cosrad = model.m_mc_one_minus_cosrad;
m_mc_norm = model.m_mc_norm;
m_mc_max = model.m_mc_max;
// Set parameter pointer(s)
m_pars.clear();
m_pars.push_back(&m_value);
// Return
return;
}
/***********************************************************************//**
* @brief Delete class members
***************************************************************************/
void GModelSpatialDiffuseMap::free_members(void)
{
// Return
return;
}
/***********************************************************************//**
* @brief Prepare sky map after loading
*
* Prepares a sky map after loading. Negative, infinite or undefined skymap
* pixels are set to zero intensity. The method also determine the centre
* and radius of a circle enclosing the map, and the Monte Carlo simulation
* cone is set to this circle.
*
* If normalize() is true, the map is furthermore normalised so that the
* total flux in the map amounts to 1 ph/cm2/s. Negative skymap pixels are
* set to zero intensity.
***************************************************************************/
void GModelSpatialDiffuseMap::prepare_map(void)
{
// Initialise centre and radius
m_centre.clear();
m_radius = 0.0;
// Determine number of skymap pixels
int npix = m_map.npix();
// Continue only if there are skymap pixels
if (npix > 0) {
// Initialise flux sum
double sum = 0.0;
// Compute flux sum and set negative or invalid pixels to zero
// intensity.
for (int i = 0; i < npix; ++i) {
double flux = m_map.flux(i);
if (flux < 0.0 ||
gammalib::is_notanumber(flux) ||
gammalib::is_infinite(flux)) {
m_map(i) = 0.0;
flux = 0.0;
}
sum += flux;
}
// Optionally normalize the sky map.
if (sum > 0.0) {
if (normalize()) {
for (int i = 0; i < npix; ++i) {
m_map(i) /= sum;
}
}
}
// If we have a HealPix map then set radius to 180 deg
if (m_map.projection()->code() == "HPX") {
m_radius = 180.0;
}
// ... otherwise compute map centre and radius
else {
// Get map centre
GSkyPixel centre(m_map.nx()/2.0, m_map.ny()/2.0);
m_centre = m_map.pix2dir(centre);
// Determine map radius
for (int i = 0; i < npix; ++i) {
double radius = m_map.inx2dir(i).dist_deg(m_centre);
if (radius > m_radius) {
m_radius = radius;
}
}
} // endelse: computed map centre and radius
// Set simulation cone
set_mc_cone(m_centre, m_radius);
} // endif: there were skymap pixels
// Return
return;
}