Veronika Vodeb / ctools

Commit 03ce9b01cb903a43ad0fbfeba08d7279a5cf35bf

Authored by Jürgen Knödlseder
1 parent 9de14b14

Add tmin and tmax parameters to csobsselect (#2297)

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Showing 8 changed files with 117 additions and 43 deletions
ChangeLog
  View file @03ce9b0
1   -2018-01-23
  1 +2018-01-24
2 2  
3 3 * Version 1.5.0 released
4 4 ========================
5 5  
  6 + Add tmin and tmax parameters to csobsselect (#2297)
6 7 Change DATE_OBS, DATE_END, TIME_OBS and TIME_END FITS keywords into DATA-OBS,
7 8 DATE-END, TIME-OBS and TIME-END
8 9 Add CUSTOM background method to csphagen script (#2284)
... ...
1   -23 January 2018
  1 +24 January 2018
2 2  
3 3  
4 4 Introduction
... ... @@ -235,7 +235,7 @@ None
235 235  
236 236 csobsselect - Select observations
237 237 ---------------------------------
238   -None
  238 +Add tmin and tmax parameters to allow selection of observation by time (#2297).
239 239  
240 240  
241 241 csphagen - Generate On/Off observations
... ...
cscripts/csobsselect.par
  View file @03ce9b0
... ... @@ -31,6 +31,8 @@ glat, r, a, -5.79,-90,90, "Galactic latitude of selection centre (deg)"
31 31 rad, r, a, 5.0,0,180, "Radius of selection circle (deg)"
32 32 width, r, a, 10.0,0,360, "Width of selection box (deg)"
33 33 height, r, a, 10.0,0,180, "Height of selection box (deg)"
  34 +tmin, t, a, NONE,,, "Start time (UTC string, JD, MJD or MET in seconds)"
  35 +tmax, t, a, NONE,,, "Stop time (UTC string, JD, MJD or MET in seconds)"
34 36  
35 37 #
36 38 # Standard parameters
... ...
cscripts/csobsselect.py
  View file @03ce9b0
... ... @@ -2,7 +2,7 @@
2 2 # ==========================================================================
3 3 # Selects observations from an observation definition XML file
4 4 #
5   -# Copyright (C) 2016-2017 Juergen Knoedlseder
  5 +# Copyright (C) 2016-2018 Juergen Knoedlseder
6 6 #
7 7 # This program is free software: you can redistribute it and/or modify
8 8 # it under the terms of the GNU General Public License as published by
... ... @@ -68,6 +68,9 @@ class csobsselect(ctools.csobservation):
68 68 self['width'].real()
69 69 self['height'].real()
70 70  
  71 + # Query time interval
  72 + self._get_gti()
  73 +
71 74 # Query ahead output model filename
72 75 if self._read_ahead():
73 76 self['outobs'].filename()
... ... @@ -83,7 +86,34 @@ class csobsselect(ctools.csobservation):
83 86 # Return
84 87 return
85 88  
86   - def _select_observation(self, obs):
  89 + def _log_selection(self, obs, msg):
  90 + """
  91 + Log observation selection
  92 +
  93 + Parameters
  94 + ----------
  95 + obs : `~gammalib.GObservation`
  96 + Observation
  97 + msg : str
  98 + Message
  99 + """
  100 + # Set observation name
  101 + if len(obs.name()) > 0:
  102 + name = obs.name()
  103 + else:
  104 + name = 'Observation'
  105 +
  106 + # Prepend obervation ID
  107 + if len(obs.id()) > 0:
  108 + msg = obs.id()+' '+msg
  109 +
  110 + # Log observation selection
  111 + self._log_value(gammalib.NORMAL, name, msg)
  112 +
  113 + # Return
  114 + return
  115 +
  116 + def _select_observation(self, obs, gti):
87 117 """
88 118 Select observation
89 119  
... ... @@ -91,6 +121,8 @@ class csobsselect(ctools.csobservation):
91 121 ----------
92 122 obs : `~gammalib.GObservation`
93 123 Observation
  124 + gti : `~gammalib.GGti`
  125 + Good time intervals
94 126  
95 127 Returns
96 128 -------
... ... @@ -103,14 +135,27 @@ class csobsselect(ctools.csobservation):
103 135 # Continue only if observation is a CTA observation
104 136 if obs.classname() == 'GCTAObservation':
105 137  
106   - # Get selection type
107   - pntselect = self['pntselect'].string()
  138 + # Get observation start and stop time
  139 + obs_gti = obs.gti()
  140 + tstart = obs_gti.tstart()
  141 + tstop = obs_gti.tstop()
  142 +
  143 + # If the observation is not within the time selection then skip it
  144 + if gti.size() > 0 and not gti.contains(tstart) and \
  145 + not gti.contains(tstop):
  146 + self._log_selection(obs, 'outside time interval')
108 147  
109   - # Dispatch according to selection type
110   - if pntselect == 'CIRCLE':
111   - select = self._select_circle(obs)
  148 + # ... otherwise select spatially
112 149 else:
113   - select = self._select_box(obs)
  150 +
  151 + # Get selection type
  152 + pntselect = self['pntselect'].string()
  153 +
  154 + # Dispatch according to selection type
  155 + if pntselect == 'CIRCLE':
  156 + select = self._select_circle(obs)
  157 + else:
  158 + select = self._select_box(obs)
114 159  
115 160 # Return selection flag
116 161 return select
... ... @@ -150,18 +195,8 @@ class csobsselect(ctools.csobservation):
150 195 select = False
151 196 msg = 'outside selection circle'
152 197  
153   - # Set observation name
154   - if len(obs.name()) > 0:
155   - name = obs.name()
156   - else:
157   - name = 'Observation'
158   -
159   - # Prepend obervation ID
160   - if len(obs.id()) > 0:
161   - msg = obs.id()+' '+msg
162   -
163 198 # Log observation selection
164   - self._log_value(gammalib.NORMAL, name, msg)
  199 + self._log_selection(obs, msg)
165 200  
166 201 # Return selection flag
167 202 return select
... ... @@ -240,18 +275,8 @@ class csobsselect(ctools.csobservation):
240 275 select = True
241 276 msg = 'inside selection box'
242 277  
243   - # Set observation name
244   - if len(obs.name()) > 0:
245   - name = obs.name()
246   - else:
247   - name = 'Observation'
248   -
249   - # Prepend obervation ID
250   - if len(obs.id()) > 0:
251   - msg = obs.id()+' '+msg
252   -
253 278 # Log observation selection
254   - self._log_value(gammalib.NORMAL, name, msg)
  279 + self._log_selection(obs, msg)
255 280  
256 281 # Return selection flag
257 282 return select
... ... @@ -269,6 +294,9 @@ class csobsselect(ctools.csobservation):
269 294 # Get parameters
270 295 self._get_parameters()
271 296  
  297 + # Get Good Time Interval (empty if no time selection is applied)
  298 + gti = self._get_gti()
  299 +
272 300 # Initialise empty observation container for selected observations
273 301 selected_obs = gammalib.GObservations()
274 302  
... ... @@ -282,7 +310,7 @@ class csobsselect(ctools.csobservation):
282 310 for obs in self.obs():
283 311  
284 312 # If observation is selected then append observation
285   - if self._select_observation(obs):
  313 + if self._select_observation(obs, gti):
286 314 selected_obs.append(obs)
287 315  
288 316 # Copy selected observations into observation
... ...
doc/source/admin/release_history/1.5.rst
  View file @03ce9b0
... ... @@ -12,6 +12,9 @@ In particular, this release provides:
12 12  
13 13 * Support of classical IACT analysis
14 14 * Specifcation of times in various formats (UTC, MJD, JD, MET)
  15 +* Spectrum generation for non-IACT data
  16 +* Generation of residual spectra
  17 +* Jupyter notebooks
15 18  
16 19  
17 20 Bug fixes
... ... @@ -28,6 +31,8 @@ Bug fixes
28 31 Improvements
29 32 ------------
30 33  
  34 +* [`2297 <https://cta-redmine.irap.omp.eu/issues/2297>`_] -
  35 + Add ``tmin`` and ``tmax`` parameters to :ref:`csobsselect`
31 36 * [`2295 <https://cta-redmine.irap.omp.eu/issues/2295>`_] -
32 37 Add ``ctools::time_reference`` constant and remove ``ctools::time_reference()``
33 38 method
... ... @@ -78,6 +83,7 @@ New features
78 83 * [`1864 <https://cta-redmine.irap.omp.eu/issues/1864>`_] -
79 84 Use t-type parameters for all ``tmin`` and ``tmax`` parameters
80 85  
  86 +
81 87 Clean up
82 88 --------
83 89  
... ...
doc/source/users/reference_manual/csobsselect.rst
  View file @03ce9b0
... ... @@ -10,9 +10,9 @@ Synopsis
10 10 --------
11 11  
12 12 This script selects all observations from an observation definiton XML file that
13   -have pointings within a specified selection region and writes these observations
14   -into a new observation definition XML file. Possible selection regions are a
15   -circle and a box, either in Galactic or Celestial coordinates.
  13 +have pointings within a specified selection region and time interval and writes
  14 +these observations into a new observation definition XML file. Possible selection
  15 +regions are a circle and a box, either in Galactic or Celestial coordinates.
16 16  
17 17  
18 18 General parameters
... ... @@ -51,6 +51,16 @@ General parameters
51 51 ``height [real]``
52 52 Height of selection box (degrees).
53 53  
  54 +``tmin [time]``
  55 + Start time (UTC string, JD, MJD or time in seconds).
  56 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no time
  57 + selection will be performed.
  58 +
  59 +``tmax [time]``
  60 + Stop time (UTC string, JD, MJD or time in seconds).
  61 + If ``INDEF``, ``NONE``, ``UNDEF`` or ``UNDEFINED`` is passed as value, no time
  62 + selection will be performed.
  63 +
54 64  
55 65 Standard parameters
56 66 -------------------
... ...
doc/source/users/tutorials/1dc/first_select_obs.rst
  View file @03ce9b0
... ... @@ -41,6 +41,7 @@ You do this with the :ref:`csobsselect` script by typing:
41 41 Galactic longitude of selection centre (deg) (0-360) [184.56] 0.0
42 42 Galactic latitude of selection centre (deg) (-90-90) [-5.79] 0.0
43 43 Radius of selection circle (deg) (0-180) [5.0] 3.0
  44 + Start time (UTC string, JD, MJD or MET in seconds) [NONE]
44 45 Output observation definition XML file [outobs.xml] obs.xml
45 46  
46 47 You selected ``CIRCLE`` as the shape of the pointing selection region,
... ...
test/test_csobsselect.py
  View file @03ce9b0
... ... @@ -72,7 +72,7 @@ class Test(test):
72 72 cmd = csobsselect+' inobs="'+self._events+'"'+ \
73 73 ' outobs="csobsselect_cmd1.xml"'+ \
74 74 ' pntselect="CIRCLE" coordsys="CEL" ra=83.63'+ \
75   - ' dec=22.01 rad=5.0'+ \
  75 + ' dec=22.01 rad=5.0 tmin=NONE tmax=NONE'+ \
76 76 ' logfile="csobsselect_cmd1.log" chatter=1'
77 77  
78 78 # Check if execution was successful
... ... @@ -86,7 +86,7 @@ class Test(test):
86 86 cmd = csobsselect+' inobs="observation_that_does_not_exist.xml"'+ \
87 87 ' outobs="csobsselect_cmd2.xml"'+ \
88 88 ' pntselect="CIRCLE" coordsys="CEL" ra=83.63'+ \
89   - ' dec=22.01 rad=5.0'+ \
  89 + ' dec=22.01 rad=5.0 tmin=NONE tmax=NONE'+ \
90 90 ' logfile="csobsselect_cmd2.log" debug=yes chatter=2'
91 91  
92 92 # Check if execution failed
... ... @@ -121,12 +121,14 @@ class Test(test):
121 121  
122 122 # Now set csobsselect parameters
123 123 obsselect['inobs'] = self._events
124   - obsselect['outobs'] = 'csobsselect_py1.xml'
125 124 obsselect['pntselect'] = 'CIRCLE'
126 125 obsselect['coordsys'] = 'CEL'
127 126 obsselect['ra'] = 83.63
128 127 obsselect['dec'] = 22.01
129 128 obsselect['rad'] = 5.0
  129 + obsselect['tmin'] = 'NONE'
  130 + obsselect['tmax'] = 'NONE'
  131 + obsselect['outobs'] = 'csobsselect_py1.xml'
130 132 obsselect['logfile'] = 'csobsselect_py1.log'
131 133 obsselect['chatter'] = 2
132 134  
... ... @@ -139,12 +141,14 @@ class Test(test):
139 141 self._check_observation_file('csobsselect_py1.xml', 1)
140 142  
141 143 # Execute csobsselect script again, now in Galactic coordinates
142   - obsselect['outobs'] = 'csobsselect_py2.xml'
143 144 obsselect['pntselect'] = 'CIRCLE'
144 145 obsselect['coordsys'] = 'GAL'
145 146 obsselect['glon'] = 184.56
146 147 obsselect['glat'] = -5.79
147 148 obsselect['rad'] = 5.0
  149 + obsselect['tmin'] = 'NONE'
  150 + obsselect['tmax'] = 'NONE'
  151 + obsselect['outobs'] = 'csobsselect_py2.xml'
148 152 obsselect['logfile'] = 'csobsselect_py2.log'
149 153 obsselect['chatter'] = 3
150 154 obsselect.logFileOpen() # Needed to get a new log file
... ... @@ -154,13 +158,15 @@ class Test(test):
154 158 self._check_observation_file('csobsselect_py2.xml', 1)
155 159  
156 160 # Execute csobsselect script again, now a box in Galactic coordinates
157   - obsselect['outobs'] = 'csobsselect_py3.xml'
158 161 obsselect['pntselect'] = 'BOX'
159 162 obsselect['coordsys'] = 'GAL'
160 163 obsselect['glon'] = 184.56
161 164 obsselect['glat'] = -5.79
162 165 obsselect['width'] = 5.0
163 166 obsselect['height'] = 5.0
  167 + obsselect['tmin'] = 'NONE'
  168 + obsselect['tmax'] = 'NONE'
  169 + obsselect['outobs'] = 'csobsselect_py3.xml'
164 170 obsselect['logfile'] = 'csobsselect_py3.log'
165 171 obsselect['chatter'] = 4
166 172 obsselect.logFileOpen() # Needed to get a new log file
... ... @@ -170,13 +176,15 @@ class Test(test):
170 176 self._check_observation_file('csobsselect_py3.xml', 1)
171 177  
172 178 # Execute csobsselect script again, now a box in celestial coordinates
173   - obsselect['outobs'] = 'csobsselect_py4.xml'
174 179 obsselect['pntselect'] = 'BOX'
175 180 obsselect['coordsys'] = 'CEL'
176 181 obsselect['ra'] = 83.63
177 182 obsselect['dec'] = 22.01
178 183 obsselect['width'] = 5.0
179 184 obsselect['height'] = 5.0
  185 + obsselect['tmin'] = 'NONE'
  186 + obsselect['tmax'] = 'NONE'
  187 + obsselect['outobs'] = 'csobsselect_py4.xml'
180 188 obsselect['logfile'] = 'csobsselect_py4.log'
181 189 obsselect['chatter'] = 4
182 190 obsselect.logFileOpen() # Needed to get a new log file
... ... @@ -185,6 +193,24 @@ class Test(test):
185 193 # Check model file
186 194 self._check_observation_file('csobsselect_py4.xml', 1)
187 195  
  196 + # Execute csobsselect script again, now with time selection
  197 + obsselect['pntselect'] = 'BOX'
  198 + obsselect['coordsys'] = 'CEL'
  199 + obsselect['ra'] = 83.63
  200 + obsselect['dec'] = 22.01
  201 + obsselect['width'] = 5.0
  202 + obsselect['height'] = 5.0
  203 + obsselect['tmin'] = 0.0
  204 + obsselect['tmax'] = 100.0
  205 + obsselect['outobs'] = 'csobsselect_py5.xml'
  206 + obsselect['logfile'] = 'csobsselect_py5.log'
  207 + obsselect['chatter'] = 4
  208 + obsselect.logFileOpen() # Needed to get a new log file
  209 + obsselect.execute()
  210 +
  211 + # Check model file
  212 + self._check_observation_file('csobsselect_py5.xml', 0)
  213 +
188 214 # Return
189 215 return
190 216  
... ...